RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 PALLDQ8WX93 1383 aa21.76■■□□□ 1.07
LIM2-201ENST00000221973 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
LIM2-201ENST00000221973 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
LIM2-201ENST00000221973 MPRIPQ6WCQ1 1025 aa21.76■■□□□ 1.07
LIM2-201ENST00000221973 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
LIM2-201ENST00000221973 PIGBQ92521 554 aa21.74■■□□□ 1.07
LIM2-201ENST00000221973 PNNQ9H307 717 aaKnown RBP21.73■■□□□ 1.07
LIM2-201ENST00000221973 POLD1P28340 1107 aa21.72■■□□□ 1.07
LIM2-201ENST00000221973 AMIGO3Q86WK7 504 aa21.72■■□□□ 1.07
LIM2-201ENST00000221973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.72■■□□□ 1.07
LIM2-201ENST00000221973 NLGN2Q8NFZ4 835 aa21.71■■□□□ 1.07
LIM2-201ENST00000221973 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
LIM2-201ENST00000221973 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
LIM2-201ENST00000221973 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
LIM2-201ENST00000221973 CHD4Q14839 1912 aa21.7■■□□□ 1.07
LIM2-201ENST00000221973 NEFMP07197 916 aa21.7■■□□□ 1.06
LIM2-201ENST00000221973 ZNF784Q8NCA9 323 aaPredicted RBP21.7■■□□□ 1.06
LIM2-201ENST00000221973 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
LIM2-201ENST00000221973 PLEKHO1Q53GL0 409 aaPredicted RBP21.69■■□□□ 1.06
LIM2-201ENST00000221973 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
LIM2-201ENST00000221973 MAPK8IP3Q9UPT6 1336 aa21.69■■□□□ 1.06
LIM2-201ENST00000221973 PHKG2P15735 406 aa21.68■■□□□ 1.06
LIM2-201ENST00000221973 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
LIM2-201ENST00000221973 SMARCC1Q92922 1105 aaPredicted RBP21.68■■□□□ 1.06
LIM2-201ENST00000221973 MSH5O43196 834 aa21.67■■□□□ 1.06
LIM2-201ENST00000221973 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
LIM2-201ENST00000221973 KLHL34Q8N239 644 aa21.67■■□□□ 1.06
LIM2-201ENST00000221973 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
LIM2-201ENST00000221973 SMIM5Q71RC9 77 aa21.66■■□□□ 1.06
LIM2-201ENST00000221973 UBR3Q6ZT12 1888 aa21.66■■□□□ 1.06
LIM2-201ENST00000221973 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
LIM2-201ENST00000221973 GPR162Q16538 588 aa21.65■■□□□ 1.06
LIM2-201ENST00000221973 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
LIM2-201ENST00000221973 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
LIM2-201ENST00000221973 PLEKHG2Q9H7P9 1386 aa21.64■■□□□ 1.06
LIM2-201ENST00000221973 ZNF530Q6P9A1 599 aaPredicted RBP21.64■■□□□ 1.05
LIM2-201ENST00000221973 LOC102724428A0A0B4J2F2 783 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 APAF1O14727 1248 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 SIK1P57059 783 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 TMOD3Q9NYL9 352 aa21.63■■□□□ 1.05
LIM2-201ENST00000221973 ITPK1Q13572 414 aa21.62■■□□□ 1.05
LIM2-201ENST00000221973 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
LIM2-201ENST00000221973 YBX3P16989 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
LIM2-201ENST00000221973 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
LIM2-201ENST00000221973 NFE2L2Q16236 605 aa21.61■■□□□ 1.05
LIM2-201ENST00000221973 C1orf141Q5JVX7 400 aa21.61■■□□□ 1.05
LIM2-201ENST00000221973 ATG3Q9NT62 314 aa21.61■■□□□ 1.05
LIM2-201ENST00000221973 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
LIM2-201ENST00000221973 NEUROD2Q15784 382 aa21.6■■□□□ 1.05
LIM2-201ENST00000221973 AK7Q96M32 723 aa21.6■■□□□ 1.05
LIM2-201ENST00000221973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
LIM2-201ENST00000221973 PHF14O94880 888 aa21.58■■□□□ 1.05
LIM2-201ENST00000221973 RIPK4P57078 832 aa21.58■■□□□ 1.05
LIM2-201ENST00000221973 AKAP4Q5JQC9 854 aa21.58■■□□□ 1.05
LIM2-201ENST00000221973 SLC4A9Q96Q91 983 aa21.58■■□□□ 1.05
LIM2-201ENST00000221973 KDM6AO15550 1401 aaPredicted RBP21.57■■□□□ 1.04
LIM2-201ENST00000221973 SSFA2P28290 1259 aa21.57■■□□□ 1.04
LIM2-201ENST00000221973 PELP1Q8IZL8 1130 aaKnown RBP21.57■■□□□ 1.04
LIM2-201ENST00000221973 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
LIM2-201ENST00000221973 GNAT3A8MTJ3 354 aa21.56■■□□□ 1.04
LIM2-201ENST00000221973 ATP6V1AP38606 617 aa21.56■■□□□ 1.04
LIM2-201ENST00000221973 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
LIM2-201ENST00000221973 ERVV-2B6SEH9 535 aa21.55■■□□□ 1.04
LIM2-201ENST00000221973 ZNF831Q5JPB2 1677 aa21.54■■□□□ 1.04
LIM2-201ENST00000221973 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
LIM2-201ENST00000221973 DCAF5Q96JK2 942 aa21.54■■□□□ 1.04
LIM2-201ENST00000221973 GNPATO15228 680 aa21.53■■□□□ 1.04
LIM2-201ENST00000221973 HSP90AB1P08238 724 aaKnown RBP21.52■■□□□ 1.04
LIM2-201ENST00000221973 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
LIM2-201ENST00000221973 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.03
LIM2-201ENST00000221973 MCM10Q7L590 875 aa21.51■■□□□ 1.03
LIM2-201ENST00000221973 IL17REQ8NFR9 667 aa21.51■■□□□ 1.03
LIM2-201ENST00000221973 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
LIM2-201ENST00000221973 TRIM35Q9UPQ4 493 aa21.51■■□□□ 1.03
LIM2-201ENST00000221973 COL5A3P25940 1745 aaPredicted RBP21.5■■□□□ 1.03
LIM2-201ENST00000221973 RNMTO43148 476 aaKnown RBP21.5■■□□□ 1.03
LIM2-201ENST00000221973 HTATSF1O43719 755 aaKnown RBP21.5■■□□□ 1.03
LIM2-201ENST00000221973 GRIN3BO60391 1043 aa21.5■■□□□ 1.03
LIM2-201ENST00000221973 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
LIM2-201ENST00000221973 THUMPD2Q9BTF0 503 aaKnown RBP21.49■■□□□ 1.03
LIM2-201ENST00000221973 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
LIM2-201ENST00000221973 RC3H1Q5TC82 1133 aaKnown RBP21.47■■□□□ 1.03
LIM2-201ENST00000221973 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
LIM2-201ENST00000221973 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
LIM2-201ENST00000221973 CABP4P57796 275 aa21.46■■□□□ 1.03
LIM2-201ENST00000221973 CCDC27Q2M243 656 aa21.46■■□□□ 1.03
LIM2-201ENST00000221973 WWC1Q8IX03 1113 aa21.46■■□□□ 1.03
LIM2-201ENST00000221973 NGEFQ8N5V2 710 aa21.46■■□□□ 1.03
LIM2-201ENST00000221973 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
LIM2-201ENST00000221973 NCBP3Q53F19 620 aaKnown RBP21.45■■□□□ 1.02
LIM2-201ENST00000221973 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.02
LIM2-201ENST00000221973 CNTNAP4Q9C0A0 1308 aa21.45■■□□□ 1.02
LIM2-201ENST00000221973 MMP10P09238 476 aa21.44■■□□□ 1.02
LIM2-201ENST00000221973 TEFQ10587 303 aa21.44■■□□□ 1.02
LIM2-201ENST00000221973 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
LIM2-201ENST00000221973 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
LIM2-201ENST00000221973 CEMIPQ8WUJ3 1361 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms