RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 MTHFSP49914 203 aa18.78■□□□□ 0.6
PDCD5-201ENST00000221784 CABP4P57796 275 aa18.78■□□□□ 0.6
PDCD5-201ENST00000221784 C1orf141Q5JVX7 400 aa18.78■□□□□ 0.6
PDCD5-201ENST00000221784 GNPATO15228 680 aa18.76■□□□□ 0.59
PDCD5-201ENST00000221784 RBM42Q9BTD8 480 aaKnown RBP18.76■□□□□ 0.59
PDCD5-201ENST00000221784 ITGB4P16144 1822 aa18.76■□□□□ 0.59
PDCD5-201ENST00000221784 TUBGCP6Q96RT7 1819 aa18.76■□□□□ 0.59
PDCD5-201ENST00000221784 C5P01031 1676 aa18.76■□□□□ 0.59
PDCD5-201ENST00000221784 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
PDCD5-201ENST00000221784 ZNF784Q8NCA9 323 aaPredicted RBP18.75■□□□□ 0.59
PDCD5-201ENST00000221784 CD2APQ9Y5K6 639 aa18.75■□□□□ 0.59
PDCD5-201ENST00000221784 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
PDCD5-201ENST00000221784 KDRP35968 1356 aa18.74■□□□□ 0.59
PDCD5-201ENST00000221784 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
PDCD5-201ENST00000221784 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
PDCD5-201ENST00000221784 UTRNP46939 3433 aa18.73■□□□□ 0.59
PDCD5-201ENST00000221784 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
PDCD5-201ENST00000221784 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
PDCD5-201ENST00000221784 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
PDCD5-201ENST00000221784 TRAPPC3LQ5T215 181 aa18.72■□□□□ 0.59
PDCD5-201ENST00000221784 RTCBQ9Y3I0 505 aaKnown RBP18.72■□□□□ 0.59
PDCD5-201ENST00000221784 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.59
PDCD5-201ENST00000221784 RC3H1Q5TC82 1133 aaKnown RBP18.71■□□□□ 0.59
PDCD5-201ENST00000221784 DIAPH1O60610 1272 aaKnown RBP18.7■□□□□ 0.58
PDCD5-201ENST00000221784 PTCD1O75127 700 aaKnown RBP18.7■□□□□ 0.58
PDCD5-201ENST00000221784 HMOX1P09601 288 aa18.7■□□□□ 0.58
PDCD5-201ENST00000221784 YBX3P16989 372 aaKnown RBP eCLIP18.7■□□□□ 0.588e-7■■□□□ 12.2
PDCD5-201ENST00000221784 TAF1LQ8IZX4 1826 aa18.7■□□□□ 0.58
PDCD5-201ENST00000221784 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
PDCD5-201ENST00000221784 RPS6KA4O75676 772 aa18.68■□□□□ 0.58
PDCD5-201ENST00000221784 CNTNAP4Q9C0A0 1308 aa18.68■□□□□ 0.58
PDCD5-201ENST00000221784 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
PDCD5-201ENST00000221784 ADRA2BP18089 450 aa18.67■□□□□ 0.58
PDCD5-201ENST00000221784 NLGN1Q8N2Q7 840 aa18.67■□□□□ 0.58
PDCD5-201ENST00000221784 ARHGEF1Q92888 912 aaKnown RBP18.67■□□□□ 0.58
PDCD5-201ENST00000221784 MMP10P09238 476 aa18.66■□□□□ 0.58
PDCD5-201ENST00000221784 LGR6Q9HBX8 967 aa18.66■□□□□ 0.58
PDCD5-201ENST00000221784 RFC4P35249 363 aa18.65■□□□□ 0.58
PDCD5-201ENST00000221784 MTHFSDQ2M296 383 aaKnown RBP18.65■□□□□ 0.58
PDCD5-201ENST00000221784 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
PDCD5-201ENST00000221784 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
PDCD5-201ENST00000221784 UBR3Q6ZT12 1888 aa18.64■□□□□ 0.57
PDCD5-201ENST00000221784 CRKLP46109 303 aaKnown RBP18.63■□□□□ 0.57
PDCD5-201ENST00000221784 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
PDCD5-201ENST00000221784 GYS1P13807 737 aa18.62■□□□□ 0.57
PDCD5-201ENST00000221784 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
PDCD5-201ENST00000221784 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
PDCD5-201ENST00000221784 INTS5Q6P9B9 1019 aaKnown RBP18.59■□□□□ 0.57
PDCD5-201ENST00000221784 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
PDCD5-201ENST00000221784 PARP3Q9Y6F1 533 aa18.59■□□□□ 0.57
PDCD5-201ENST00000221784 CHD4Q14839 1912 aa18.59■□□□□ 0.57
PDCD5-201ENST00000221784 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
PDCD5-201ENST00000221784 TGFB2P61812 414 aa18.58■□□□□ 0.56
PDCD5-201ENST00000221784 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.56
PDCD5-201ENST00000221784 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
PDCD5-201ENST00000221784 CFAP53Q96M91 514 aa18.57■□□□□ 0.56
PDCD5-201ENST00000221784 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
PDCD5-201ENST00000221784 SRP68Q9UHB9 627 aaKnown RBP18.56■□□□□ 0.56
PDCD5-201ENST00000221784 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
PDCD5-201ENST00000221784 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
PDCD5-201ENST00000221784 CYP19A1P11511 503 aaPredicted RBP18.55■□□□□ 0.56
PDCD5-201ENST00000221784 C1QTNF8P60827 252 aa18.55■□□□□ 0.56
PDCD5-201ENST00000221784 COL3A1P02461 1466 aaPredicted RBP18.54■□□□□ 0.56
PDCD5-201ENST00000221784 A0A0G2JLW4 131 aa18.54■□□□□ 0.56
PDCD5-201ENST00000221784 FKBP8Q14318 412 aa18.54■□□□□ 0.56
PDCD5-201ENST00000221784 VSIG10Q8N0Z9 540 aa18.54■□□□□ 0.56
PDCD5-201ENST00000221784 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
PDCD5-201ENST00000221784 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
PDCD5-201ENST00000221784 ZPR1O75312 459 aa18.53■□□□□ 0.56
PDCD5-201ENST00000221784 GIGYF1O75420 1035 aaPredicted RBP18.53■□□□□ 0.56
PDCD5-201ENST00000221784 TEFQ10587 303 aa18.53■□□□□ 0.56
PDCD5-201ENST00000221784 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
PDCD5-201ENST00000221784 MRC1P22897 1456 aa18.52■□□□□ 0.56
PDCD5-201ENST00000221784 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
PDCD5-201ENST00000221784 SOS1Q07889 1333 aaPredicted RBP18.51■□□□□ 0.55
PDCD5-201ENST00000221784 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 DPEP1P16444 411 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 USPL1Q5W0Q7 1092 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 PHACTR3Q96KR7 559 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 BCS1LQ9Y276 419 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 COL5A3P25940 1745 aaPredicted RBP18.51■□□□□ 0.55
PDCD5-201ENST00000221784 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
PDCD5-201ENST00000221784 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
PDCD5-201ENST00000221784 MYH14Q7Z406 1995 aaKnown RBP18.5■□□□□ 0.55
PDCD5-201ENST00000221784 CICQ96RK0 1608 aaPredicted RBP18.5■□□□□ 0.55
PDCD5-201ENST00000221784 STARD3NLO95772 234 aa18.5■□□□□ 0.55
PDCD5-201ENST00000221784 TM4SF1P30408 202 aa18.5■□□□□ 0.55
PDCD5-201ENST00000221784 RSPH6AQ9H0K4 717 aa18.5■□□□□ 0.55
PDCD5-201ENST00000221784 ZBTB1Q9Y2K1 713 aa18.5■□□□□ 0.55
PDCD5-201ENST00000221784 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
PDCD5-201ENST00000221784 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
PDCD5-201ENST00000221784 DDR1Q08345 913 aa18.49■□□□□ 0.55
PDCD5-201ENST00000221784 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
PDCD5-201ENST00000221784 NARFQ9UHQ1 456 aa18.49■□□□□ 0.55
PDCD5-201ENST00000221784 ATP10DQ9P241 1426 aa18.49■□□□□ 0.55
PDCD5-201ENST00000221784 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
PDCD5-201ENST00000221784 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
PDCD5-201ENST00000221784 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
PDCD5-201ENST00000221784 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms