RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 ASAP1Q9ULH1 1129 aa19.36■□□□□ 0.69
RHOXF1-201ENST00000217999 SCN11AQ9UI33 1791 aa19.35■□□□□ 0.69
RHOXF1-201ENST00000217999 ATP6V1AP38606 617 aa19.35■□□□□ 0.69
RHOXF1-201ENST00000217999 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
RHOXF1-201ENST00000217999 SSFA2P28290 1259 aa19.34■□□□□ 0.69
RHOXF1-201ENST00000217999 PHF14O94880 888 aa19.33■□□□□ 0.68
RHOXF1-201ENST00000217999 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
RHOXF1-201ENST00000217999 AKAP4Q5JQC9 854 aa19.33■□□□□ 0.68
RHOXF1-201ENST00000217999 ATG3Q9NT62 314 aa19.33■□□□□ 0.68
RHOXF1-201ENST00000217999 YY1P25490 414 aa19.32■□□□□ 0.68
RHOXF1-201ENST00000217999 LINC00116Q8NCU8 138 aa19.32■□□□□ 0.68
RHOXF1-201ENST00000217999 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
RHOXF1-201ENST00000217999 RBM42Q9BTD8 480 aaKnown RBP19.32■□□□□ 0.68
RHOXF1-201ENST00000217999 COL3A1P02461 1466 aaPredicted RBP19.32■□□□□ 0.68
RHOXF1-201ENST00000217999 COL5A3P25940 1745 aaPredicted RBP19.31■□□□□ 0.68
RHOXF1-201ENST00000217999 GNPATO15228 680 aa19.31■□□□□ 0.68
RHOXF1-201ENST00000217999 HMOX1P09601 288 aa19.31■□□□□ 0.68
RHOXF1-201ENST00000217999 MSL1Q68DK7 614 aa19.31■□□□□ 0.68
RHOXF1-201ENST00000217999 MRC1P22897 1456 aa19.3■□□□□ 0.68
RHOXF1-201ENST00000217999 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.3■□□□□ 0.68
RHOXF1-201ENST00000217999 CICQ96RK0 1608 aaPredicted RBP19.29■□□□□ 0.68
RHOXF1-201ENST00000217999 ITPK1Q13572 414 aa19.29■□□□□ 0.68
RHOXF1-201ENST00000217999 VIRMAQ69YN4 1812 aaKnown RBP19.29■□□□□ 0.68
RHOXF1-201ENST00000217999 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
RHOXF1-201ENST00000217999 RTCBQ9Y3I0 505 aaKnown RBP19.27■□□□□ 0.68
RHOXF1-201ENST00000217999 CNTNAP4Q9C0A0 1308 aa19.26■□□□□ 0.67
RHOXF1-201ENST00000217999 GPR162Q16538 588 aa19.26■□□□□ 0.67
RHOXF1-201ENST00000217999 NFATC2IPQ8NCF5 419 aa19.26■□□□□ 0.67
RHOXF1-201ENST00000217999 ADAMTS7Q9UKP4 1686 aa19.26■□□□□ 0.67
RHOXF1-201ENST00000217999 CHD4Q14839 1912 aa19.25■□□□□ 0.67
RHOXF1-201ENST00000217999 ADRA2BP18089 450 aa19.25■□□□□ 0.67
RHOXF1-201ENST00000217999 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
RHOXF1-201ENST00000217999 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
RHOXF1-201ENST00000217999 PTCD1O75127 700 aaKnown RBP19.24■□□□□ 0.67
RHOXF1-201ENST00000217999 RC3H1Q5TC82 1133 aaKnown RBP19.24■□□□□ 0.67
RHOXF1-201ENST00000217999 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
RHOXF1-201ENST00000217999 GAS2L2Q8NHY3 880 aa19.24■□□□□ 0.67
RHOXF1-201ENST00000217999 TJP1Q07157 1748 aa19.24■□□□□ 0.67
RHOXF1-201ENST00000217999 RNMTO43148 476 aaKnown RBP19.22■□□□□ 0.67
RHOXF1-201ENST00000217999 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
RHOXF1-201ENST00000217999 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
RHOXF1-201ENST00000217999 AMIGO3Q86WK7 504 aa19.22■□□□□ 0.67
RHOXF1-201ENST00000217999 CD2APQ9Y5K6 639 aa19.22■□□□□ 0.67
RHOXF1-201ENST00000217999 C4AP0C0L4 1744 aa19.21■□□□□ 0.67
RHOXF1-201ENST00000217999 NLGN2Q8NFZ4 835 aa19.21■□□□□ 0.67
RHOXF1-201ENST00000217999 SLC4A9Q96Q91 983 aa19.21■□□□□ 0.67
RHOXF1-201ENST00000217999 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
RHOXF1-201ENST00000217999 PPP2R1AP30153 589 aa19.19■□□□□ 0.66
RHOXF1-201ENST00000217999 RFC4P35249 363 aa19.19■□□□□ 0.66
RHOXF1-201ENST00000217999 GNAT3A8MTJ3 354 aa19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 CRKLP46109 303 aaKnown RBP19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 TEFQ10587 303 aa19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 SMIM5Q71RC9 77 aa19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
RHOXF1-201ENST00000217999 UBR2Q8IWV8 1755 aa19.17■□□□□ 0.66
RHOXF1-201ENST00000217999 KCPQ6ZWJ8 1503 aa19.17■□□□□ 0.66
RHOXF1-201ENST00000217999 GRIN3BO60391 1043 aa19.17■□□□□ 0.66
RHOXF1-201ENST00000217999 NLGN1Q8N2Q7 840 aa19.17■□□□□ 0.66
RHOXF1-201ENST00000217999 MYH14Q7Z406 1995 aaKnown RBP19.17■□□□□ 0.66
RHOXF1-201ENST00000217999 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
RHOXF1-201ENST00000217999 PRKAR2BP31323 418 aa19.16■□□□□ 0.66
RHOXF1-201ENST00000217999 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
RHOXF1-201ENST00000217999 MMP10P09238 476 aa19.15■□□□□ 0.66
RHOXF1-201ENST00000217999 ARHGEF1Q92888 912 aaKnown RBP19.15■□□□□ 0.66
RHOXF1-201ENST00000217999 NEFMP07197 916 aa19.14■□□□□ 0.65
RHOXF1-201ENST00000217999 VSIG10Q8N0Z9 540 aa19.14■□□□□ 0.65
RHOXF1-201ENST00000217999 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
RHOXF1-201ENST00000217999 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.65
RHOXF1-201ENST00000217999 SIPA1L3O60292 1781 aaPredicted RBP19.14■□□□□ 0.65
RHOXF1-201ENST00000217999 SLC39A6Q13433 755 aa19.13■□□□□ 0.65
RHOXF1-201ENST00000217999 KIF13BQ9NQT8 1826 aa19.13■□□□□ 0.65
RHOXF1-201ENST00000217999 DNAJC10Q8IXB1 793 aa19.12■□□□□ 0.65
RHOXF1-201ENST00000217999 PARP3Q9Y6F1 533 aa19.12■□□□□ 0.65
RHOXF1-201ENST00000217999 C10orf71Q711Q0 1435 aa19.11■□□□□ 0.65
RHOXF1-201ENST00000217999 USP42Q9H9J4 1324 aaKnown RBP19.11■□□□□ 0.65
RHOXF1-201ENST00000217999 FCHSD2O94868 740 aa19.11■□□□□ 0.65
RHOXF1-201ENST00000217999 GYS1P13807 737 aa19.11■□□□□ 0.65
RHOXF1-201ENST00000217999 RTF1Q92541 710 aaKnown RBP19.11■□□□□ 0.65
RHOXF1-201ENST00000217999 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
RHOXF1-201ENST00000217999 COL15A1P39059 1388 aa19.09■□□□□ 0.65
RHOXF1-201ENST00000217999 ZPR1O75312 459 aa19.09■□□□□ 0.65
RHOXF1-201ENST00000217999 STARD3NLO95772 234 aa19.09■□□□□ 0.65
RHOXF1-201ENST00000217999 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
RHOXF1-201ENST00000217999 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
RHOXF1-201ENST00000217999 CYP19A1P11511 503 aaPredicted RBP19.08■□□□□ 0.64
RHOXF1-201ENST00000217999 INTS5Q6P9B9 1019 aaKnown RBP19.08■□□□□ 0.64
RHOXF1-201ENST00000217999 ZNF790Q6PG37 636 aa19.08■□□□□ 0.64
RHOXF1-201ENST00000217999 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
RHOXF1-201ENST00000217999 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
RHOXF1-201ENST00000217999 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
RHOXF1-201ENST00000217999 PHACTR3Q96KR7 559 aa19.07■□□□□ 0.64
RHOXF1-201ENST00000217999 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
RHOXF1-201ENST00000217999 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
RHOXF1-201ENST00000217999 UTRNP46939 3433 aa19.07■□□□□ 0.64
RHOXF1-201ENST00000217999 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
RHOXF1-201ENST00000217999 TGFB2P61812 414 aa19.06■□□□□ 0.64
RHOXF1-201ENST00000217999 SRP68Q9UHB9 627 aaKnown RBP19.06■□□□□ 0.64
RHOXF1-201ENST00000217999 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
RHOXF1-201ENST00000217999 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms