RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ATP6V1AP38606 617 aa27.06■■□□□ 1.92
SYNGR1-201ENST00000216155 ZNF831Q5JPB2 1677 aa27.05■■□□□ 1.92
SYNGR1-201ENST00000216155 GNPATO15228 680 aa27.05■■□□□ 1.92
SYNGR1-201ENST00000216155 KDM6AO15550 1401 aaPredicted RBP27.04■■□□□ 1.92
SYNGR1-201ENST00000216155 GIGYF1O75420 1035 aaPredicted RBP27.03■■□□□ 1.92
SYNGR1-201ENST00000216155 COL5A3P25940 1745 aaPredicted RBP27.03■■□□□ 1.92
SYNGR1-201ENST00000216155 SENP3-EIF4A1A0A087X0R7 540 aa27.02■■□□□ 1.92
SYNGR1-201ENST00000216155 ERVV-2B6SEH9 535 aa27■■□□□ 1.91
SYNGR1-201ENST00000216155 HSP90AB1P08238 724 aaKnown RBP27■■□□□ 1.91
SYNGR1-201ENST00000216155 SLC4A9Q96Q91 983 aa27■■□□□ 1.91
SYNGR1-201ENST00000216155 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
SYNGR1-201ENST00000216155 ATP10DQ9P241 1426 aa26.99■■□□□ 1.91
SYNGR1-201ENST00000216155 PLEKHO1Q53GL0 409 aaPredicted RBP26.98■■□□□ 1.91
SYNGR1-201ENST00000216155 ZNF530Q6P9A1 599 aaPredicted RBP26.98■■□□□ 1.91
SYNGR1-201ENST00000216155 AEBP1Q8IUX7 1158 aa26.98■■□□□ 1.91
SYNGR1-201ENST00000216155 MORC1Q86VD1 984 aa26.97■■□□□ 1.91
SYNGR1-201ENST00000216155 ADCY9O60503 1353 aa26.97■■□□□ 1.91
SYNGR1-201ENST00000216155 WWC3Q9ULE0 1092 aa26.96■■□□□ 1.91
SYNGR1-201ENST00000216155 KIF13BQ9NQT8 1826 aa26.95■■□□□ 1.91
SYNGR1-201ENST00000216155 AMOTQ4VCS5 1084 aa26.95■■□□□ 1.9
SYNGR1-201ENST00000216155 RBM42Q9BTD8 480 aaKnown RBP26.95■■□□□ 1.9
SYNGR1-201ENST00000216155 KIAA1551Q9HCM1 1747 aa26.95■■□□□ 1.9
SYNGR1-201ENST00000216155 CICQ96RK0 1608 aaPredicted RBP26.94■■□□□ 1.9
SYNGR1-201ENST00000216155 MMP10P09238 476 aa26.94■■□□□ 1.9
SYNGR1-201ENST00000216155 CCER1Q8TC90 406 aaPredicted RBP26.94■■□□□ 1.9
SYNGR1-201ENST00000216155 RTCBQ9Y3I0 505 aaKnown RBP26.94■■□□□ 1.9
SYNGR1-201ENST00000216155 C4AP0C0L4 1744 aa26.93■■□□□ 1.9
SYNGR1-201ENST00000216155 CNTNAP4Q9C0A0 1308 aa26.93■■□□□ 1.9
SYNGR1-201ENST00000216155 MYH14Q7Z406 1995 aaKnown RBP26.92■■□□□ 1.9
SYNGR1-201ENST00000216155 CABP4P57796 275 aa26.92■■□□□ 1.9
SYNGR1-201ENST00000216155 PXDNLA1KZ92 1463 aa26.92■■□□□ 1.9
SYNGR1-201ENST00000216155 TRAPPC3LQ5T215 181 aa26.91■■□□□ 1.9
SYNGR1-201ENST00000216155 KNSTRNQ9Y448 316 aa26.91■■□□□ 1.9
SYNGR1-201ENST00000216155 MTHFSP49914 203 aa26.9■■□□□ 1.9
SYNGR1-201ENST00000216155 C1orf141Q5JVX7 400 aa26.9■■□□□ 1.9
SYNGR1-201ENST00000216155 RC3H1Q5TC82 1133 aaKnown RBP26.9■■□□□ 1.9
SYNGR1-201ENST00000216155 SULT6B1Q6IMI4 303 aa26.9■■□□□ 1.9
SYNGR1-201ENST00000216155 C10orf71Q711Q0 1435 aa26.9■■□□□ 1.9
SYNGR1-201ENST00000216155 SCN11AQ9UI33 1791 aa26.89■■□□□ 1.9
SYNGR1-201ENST00000216155 ADRA2BP18089 450 aa26.89■■□□□ 1.9
SYNGR1-201ENST00000216155 IL13P35225 146 aa26.89■■□□□ 1.9
SYNGR1-201ENST00000216155 TJP1Q07157 1748 aa26.89■■□□□ 1.9
SYNGR1-201ENST00000216155 AMER1Q5JTC6 1135 aaPredicted RBP26.88■■□□□ 1.89
SYNGR1-201ENST00000216155 ARHGEF1Q92888 912 aaKnown RBP26.88■■□□□ 1.89
SYNGR1-201ENST00000216155 N4BP2Q86UW6 1770 aaPredicted RBP26.88■■□□□ 1.89
SYNGR1-201ENST00000216155 RPS6KA4O75676 772 aa26.86■■□□□ 1.89
SYNGR1-201ENST00000216155 NLGN1Q8N2Q7 840 aa26.86■■□□□ 1.89
SYNGR1-201ENST00000216155 PTCD1O75127 700 aaKnown RBP26.85■■□□□ 1.89
SYNGR1-201ENST00000216155 GYS1P13807 737 aa26.85■■□□□ 1.89
SYNGR1-201ENST00000216155 GPBP1L1Q9HC44 474 aaPredicted RBP26.85■■□□□ 1.89
SYNGR1-201ENST00000216155 KIF7Q2M1P5 1343 aa26.85■■□□□ 1.89
SYNGR1-201ENST00000216155 CEP350Q5VT06 3117 aa26.84■■□□□ 1.89
SYNGR1-201ENST00000216155 NFATC2IPQ8NCF5 419 aa26.84■■□□□ 1.89
SYNGR1-201ENST00000216155 RFC4P35249 363 aa26.83■■□□□ 1.89
SYNGR1-201ENST00000216155 MRC1P22897 1456 aa26.82■■□□□ 1.88
SYNGR1-201ENST00000216155 ZNF526Q8TF50 670 aaPredicted RBP26.82■■□□□ 1.88
SYNGR1-201ENST00000216155 BRCA1P38398 1863 aaKnown RBP26.81■■□□□ 1.88
SYNGR1-201ENST00000216155 CRKLP46109 303 aaKnown RBP26.81■■□□□ 1.88
SYNGR1-201ENST00000216155 TGFB2P61812 414 aa26.81■■□□□ 1.88
SYNGR1-201ENST00000216155 VIRMAQ69YN4 1812 aaKnown RBP26.8■■□□□ 1.88
SYNGR1-201ENST00000216155 ADAMTS7Q9UKP4 1686 aa26.79■■□□□ 1.88
SYNGR1-201ENST00000216155 AKAP4Q5JQC9 854 aa26.79■■□□□ 1.88
SYNGR1-201ENST00000216155 CCDC87Q9NVE4 849 aa26.79■■□□□ 1.88
SYNGR1-201ENST00000216155 A0A0G2JLW4 131 aa26.77■■□□□ 1.88
SYNGR1-201ENST00000216155 SRP68Q9UHB9 627 aaKnown RBP26.77■■□□□ 1.88
SYNGR1-201ENST00000216155 PARP3Q9Y6F1 533 aa26.77■■□□□ 1.88
SYNGR1-201ENST00000216155 USP42Q9H9J4 1324 aaKnown RBP26.76■■□□□ 1.87
SYNGR1-201ENST00000216155 BCS1LQ9Y276 419 aa26.76■■□□□ 1.87
SYNGR1-201ENST00000216155 HMOX1P09601 288 aa26.75■■□□□ 1.87
SYNGR1-201ENST00000216155 DPEP1P16444 411 aa26.75■■□□□ 1.87
SYNGR1-201ENST00000216155 SLC52A2Q9HAB3 445 aa26.75■■□□□ 1.87
SYNGR1-201ENST00000216155 LGR6Q9HBX8 967 aa26.74■■□□□ 1.87
SYNGR1-201ENST00000216155 KCPQ6ZWJ8 1503 aa26.74■■□□□ 1.87
SYNGR1-201ENST00000216155 PER1O15534 1290 aaPredicted RBP26.73■■□□□ 1.87
SYNGR1-201ENST00000216155 FKBP8Q14318 412 aa26.73■■□□□ 1.87
SYNGR1-201ENST00000216155 INTS5Q6P9B9 1019 aaKnown RBP26.73■■□□□ 1.87
SYNGR1-201ENST00000216155 ARFGEF1Q9Y6D6 1849 aa26.72■■□□□ 1.87
SYNGR1-201ENST00000216155 RNMTO43148 476 aaKnown RBP26.71■■□□□ 1.87
SYNGR1-201ENST00000216155 DDR1Q08345 913 aa26.71■■□□□ 1.87
SYNGR1-201ENST00000216155 CC2D1BQ5T0F9 858 aaKnown RBP26.71■■□□□ 1.87
SYNGR1-201ENST00000216155 DNAJC10Q8IXB1 793 aa26.71■■□□□ 1.87
SYNGR1-201ENST00000216155 COL3A1P02461 1466 aaPredicted RBP26.7■■□□□ 1.87
SYNGR1-201ENST00000216155 KIF3CO14782 793 aa26.69■■□□□ 1.86
SYNGR1-201ENST00000216155 FCHSD2O94868 740 aa26.69■■□□□ 1.86
SYNGR1-201ENST00000216155 KCNA3P22001 575 aa26.69■■□□□ 1.86
SYNGR1-201ENST00000216155 SLC39A6Q13433 755 aa26.69■■□□□ 1.86
SYNGR1-201ENST00000216155 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
SYNGR1-201ENST00000216155 SOS1Q07889 1333 aaPredicted RBP26.68■■□□□ 1.86
SYNGR1-201ENST00000216155 DIAPH1O60610 1272 aaKnown RBP26.68■■□□□ 1.86
SYNGR1-201ENST00000216155 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
SYNGR1-201ENST00000216155 CYP19A1P11511 503 aaPredicted RBP26.66■■□□□ 1.86
SYNGR1-201ENST00000216155 HSPA6P17066 643 aa26.66■■□□□ 1.86
SYNGR1-201ENST00000216155 ARHGAP27Q6ZUM4 889 aa26.66■■□□□ 1.86
SYNGR1-201ENST00000216155 POLRMTO00411 1230 aaKnown RBP26.65■■□□□ 1.86
SYNGR1-201ENST00000216155 COL15A1P39059 1388 aa26.64■■□□□ 1.86
SYNGR1-201ENST00000216155 NPC1L1Q9UHC9 1359 aa26.64■■□□□ 1.86
SYNGR1-201ENST00000216155 USPL1Q5W0Q7 1092 aa26.64■■□□□ 1.86
SYNGR1-201ENST00000216155 TM4SF1P30408 202 aa26.63■■□□□ 1.85
SYNGR1-201ENST00000216155 PIM2Q9P1W9 311 aa26.63■■□□□ 1.85
SYNGR1-201ENST00000216155 ZBTB1Q9Y2K1 713 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms