RNA–Protein interactions for RNA: ENST00000211921.11

LST1-201, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-201ENST00000211921 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
LST1-201ENST00000211921 CABP4P57796 275 aa15.38■□□□□ 0.05
LST1-201ENST00000211921 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
LST1-201ENST00000211921 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
LST1-201ENST00000211921 COL5A3P25940 1745 aaPredicted RBP15.37■□□□□ 0.05
LST1-201ENST00000211921 PHF14O94880 888 aa15.37■□□□□ 0.05
LST1-201ENST00000211921 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
LST1-201ENST00000211921 COL23A1Q86Y22 540 aaPredicted RBP15.37■□□□□ 0.05
LST1-201ENST00000211921 CHD4Q14839 1912 aa15.37■□□□□ 0.05
LST1-201ENST00000211921 HMOX1P09601 288 aa15.36■□□□□ 0.05
LST1-201ENST00000211921 MSL1Q68DK7 614 aa15.36■□□□□ 0.05
LST1-201ENST00000211921 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
LST1-201ENST00000211921 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
LST1-201ENST00000211921 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
LST1-201ENST00000211921 U2SURPO15042 1029 aaKnown RBP15.34■□□□□ 0.05
LST1-201ENST00000211921 GNPATO15228 680 aa15.34■□□□□ 0.05
LST1-201ENST00000211921 YY1P25490 414 aa15.34■□□□□ 0.05
LST1-201ENST00000211921 AKAP4Q5JQC9 854 aa15.34■□□□□ 0.05
LST1-201ENST00000211921 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
LST1-201ENST00000211921 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.05
LST1-201ENST00000211921 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
LST1-201ENST00000211921 SSFA2P28290 1259 aa15.33■□□□□ 0.04
LST1-201ENST00000211921 ITPK1Q13572 414 aa15.32■□□□□ 0.04
LST1-201ENST00000211921 GPR162Q16538 588 aa15.31■□□□□ 0.04
LST1-201ENST00000211921 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
LST1-201ENST00000211921 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
LST1-201ENST00000211921 MRC1P22897 1456 aa15.31■□□□□ 0.04
LST1-201ENST00000211921 CICQ96RK0 1608 aaPredicted RBP15.31■□□□□ 0.04
LST1-201ENST00000211921 TJP1Q07157 1748 aa15.31■□□□□ 0.04
LST1-201ENST00000211921 PTCD1O75127 700 aaKnown RBP15.3■□□□□ 0.04
LST1-201ENST00000211921 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
LST1-201ENST00000211921 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
LST1-201ENST00000211921 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
LST1-201ENST00000211921 MYH14Q7Z406 1995 aaKnown RBP15.29■□□□□ 0.04
LST1-201ENST00000211921 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
LST1-201ENST00000211921 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
LST1-201ENST00000211921 CNTNAP4Q9C0A0 1308 aa15.27■□□□□ 0.04
LST1-201ENST00000211921 MTHFSDQ2M296 383 aaKnown RBP15.27■□□□□ 0.04
LST1-201ENST00000211921 SMIM5Q71RC9 77 aa15.27■□□□□ 0.04
LST1-201ENST00000211921 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
LST1-201ENST00000211921 GAS2L2Q8NHY3 880 aa15.27■□□□□ 0.04
LST1-201ENST00000211921 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
LST1-201ENST00000211921 RNMTO43148 476 aaKnown RBP15.26■□□□□ 0.03
LST1-201ENST00000211921 ADRA2BP18089 450 aa15.26■□□□□ 0.03
LST1-201ENST00000211921 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
LST1-201ENST00000211921 NLGN2Q8NFZ4 835 aa15.26■□□□□ 0.03
LST1-201ENST00000211921 PPP2R1AP30153 589 aa15.25■□□□□ 0.03
LST1-201ENST00000211921 RFC4P35249 363 aa15.25■□□□□ 0.03
LST1-201ENST00000211921 RC3H1Q5TC82 1133 aaKnown RBP15.25■□□□□ 0.03
LST1-201ENST00000211921 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
LST1-201ENST00000211921 LGR6Q9HBX8 967 aa15.25■□□□□ 0.03
LST1-201ENST00000211921 CD2APQ9Y5K6 639 aa15.25■□□□□ 0.03
LST1-201ENST00000211921 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
LST1-201ENST00000211921 TEFQ10587 303 aa15.24■□□□□ 0.03
LST1-201ENST00000211921 GNAT3A8MTJ3 354 aa15.23■□□□□ 0.03
LST1-201ENST00000211921 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
LST1-201ENST00000211921 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
LST1-201ENST00000211921 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
LST1-201ENST00000211921 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
LST1-201ENST00000211921 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
LST1-201ENST00000211921 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
LST1-201ENST00000211921 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
LST1-201ENST00000211921 MMP10P09238 476 aa15.22■□□□□ 0.03
LST1-201ENST00000211921 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
LST1-201ENST00000211921 GOLGB1Q14789 3259 aaKnown RBP15.21■□□□□ 0.03
LST1-201ENST00000211921 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
LST1-201ENST00000211921 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
LST1-201ENST00000211921 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
LST1-201ENST00000211921 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
LST1-201ENST00000211921 NEFMP07197 916 aa15.2■□□□□ 0.02
LST1-201ENST00000211921 RSPH6AQ9H0K4 717 aa15.2■□□□□ 0.02
LST1-201ENST00000211921 CCDC87Q9NVE4 849 aa15.2■□□□□ 0.02
LST1-201ENST00000211921 N4BP2Q86UW6 1770 aaPredicted RBP15.19■□□□□ 0.02
LST1-201ENST00000211921 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
LST1-201ENST00000211921 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
LST1-201ENST00000211921 UTRNP46939 3433 aa15.19■□□□□ 0.02
LST1-201ENST00000211921 DLG5Q8TDM6 1919 aa15.18■□□□□ 0.02
LST1-201ENST00000211921 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
LST1-201ENST00000211921 ZPR1O75312 459 aa15.17■□□□□ 0.02
LST1-201ENST00000211921 FCHSD2O94868 740 aa15.17■□□□□ 0.02
LST1-201ENST00000211921 GYS1P13807 737 aa15.17■□□□□ 0.02
LST1-201ENST00000211921 VSIG10Q8N0Z9 540 aa15.17■□□□□ 0.02
LST1-201ENST00000211921 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
LST1-201ENST00000211921 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
LST1-201ENST00000211921 COL15A1P39059 1388 aa15.16■□□□□ 0.02
LST1-201ENST00000211921 STARD3NLO95772 234 aa15.16■□□□□ 0.02
LST1-201ENST00000211921 YBX3P16989 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
LST1-201ENST00000211921 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
LST1-201ENST00000211921 INTS5Q6P9B9 1019 aaKnown RBP15.15■□□□□ 0.02
LST1-201ENST00000211921 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
LST1-201ENST00000211921 IL17REQ8NFR9 667 aa15.15■□□□□ 0.02
LST1-201ENST00000211921 SRP68Q9UHB9 627 aaKnown RBP15.15■□□□□ 0.02
LST1-201ENST00000211921 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
LST1-201ENST00000211921 C10orf71Q711Q0 1435 aa15.15■□□□□ 0.02
LST1-201ENST00000211921 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
LST1-201ENST00000211921 KIAA1551Q9HCM1 1747 aa15.14■□□□□ 0.01
LST1-201ENST00000211921 CEMIPQ8WUJ3 1361 aa15.14■□□□□ 0.01
LST1-201ENST00000211921 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
LST1-201ENST00000211921 ZNF784Q8NCA9 323 aaPredicted RBP15.14■□□□□ 0.01
LST1-201ENST00000211921 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms