RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Ddx58Q6Q899 926 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Chmp4cQ9D7F7 232 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Nek4Q9Z1J2 792 aa18.68■□□□□ 0.58
Upf1-202ENSMUST00000215817 Echdc1Q9D9V3 322 aa18.67■□□□□ 0.58
Upf1-202ENSMUST00000215817 Mbd5B1AYB6 1498 aa18.67■□□□□ 0.58
Upf1-202ENSMUST00000215817 Vamp4O70480 141 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Tomm22Q9CPQ3 142 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Adamts13Q769J6 1426 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Ybx3Q9JKB3 361 aaKnown RBP18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Cyp7a1Q64505 503 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Cep170bQ80U49 1574 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Ncapd2Q8K2Z4 1392 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 Ppp1r42Q8R1Z4 357 aa18.66■□□□□ 0.58
Upf1-202ENSMUST00000215817 PtmaP26350 111 aa18.65■□□□□ 0.58
Upf1-202ENSMUST00000215817 Rbm26Q6NZN0 1012 aaKnown RBP18.65■□□□□ 0.58
Upf1-202ENSMUST00000215817 Smarca5Q91ZW3 1051 aaKnown RBP18.65■□□□□ 0.58
Upf1-202ENSMUST00000215817 Rad17Q6NXW6 688 aa18.65■□□□□ 0.58
Upf1-202ENSMUST00000215817 Ccdc85cE9Q6B2 420 aa18.64■□□□□ 0.58
Upf1-202ENSMUST00000215817 Jarid2Q62315 1234 aa18.64■□□□□ 0.58
Upf1-202ENSMUST00000215817 Zc3h12cQ5DTV4 884 aa18.64■□□□□ 0.57
Upf1-202ENSMUST00000215817 Larp1Q6ZQ58 1072 aaKnown RBP18.64■□□□□ 0.57
Upf1-202ENSMUST00000215817 Cetn4Q8K4K1 168 aa18.64■□□□□ 0.57
Upf1-202ENSMUST00000215817 Lmbr1lQ9D1E5 489 aa18.64■□□□□ 0.57
Upf1-202ENSMUST00000215817 Rims2Q9EQZ7 1530 aa18.63■□□□□ 0.57
Upf1-202ENSMUST00000215817 Abl1P00520 1123 aa18.63■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ankrd23Q812A3 306 aa18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 Cwc25Q9DBF7 416 aa18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 Dnai1Q8C0M8 701 aa18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 Topbp1Q6ZQF0 1515 aa18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 AampJ3QN89 436 aa18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 RtcbQ99LF4 505 aaKnown RBP18.62■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ak7Q9D2H2 614 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Arhgef28P97433 1693 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 P2rx7Q9Z1M0 595 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Mroh1E0CZ22 1640 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Myo5cE9Q1F5 1742 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Anapc15P60007 132 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Gprasp1Q5U4C1 1347 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 SympkQ80X82 1284 aa18.61■□□□□ 0.57
Upf1-202ENSMUST00000215817 Washc4Q3UMB9 1173 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ddx11Q6AXC6 880 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Znf428Q8C1M2 176 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Cep152A2AUM9 1736 aaKnown RBP18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ankrd50F7BE84 1390 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Pard3Q99NH2 1333 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Gimap8Q75N62 688 aa18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 CarsQ9ER72 831 aaKnown RBP18.6■□□□□ 0.57
Upf1-202ENSMUST00000215817 Slc26a8Q8R0C3 999 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 TnrQ8BYI9 1358 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 Zkscan2G3X952 960 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 ChgaP26339 463 aaKnown RBP18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 Aifm3Q3TY86 605 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 Kdm6aO70546 1401 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 Phactr2B1AVP0 632 aa18.59■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ano8Q6PB70 1060 aa18.58■□□□□ 0.57
Upf1-202ENSMUST00000215817 Ppfibp2O35711 882 aa18.58■□□□□ 0.56
Upf1-202ENSMUST00000215817 Cog6Q8R3I3 657 aa18.58■□□□□ 0.56
Upf1-202ENSMUST00000215817 Adam1aQ60813 791 aa18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 Dip2aQ8BWT5 1523 aa18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 PtpruB1AUH1 1446 aa18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 Bicc1Q99MQ1 977 aaKnown RBP18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 Gnat3Q3V3I2 354 aa18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 Zcrb1Q9CZ96 217 aaKnown RBP18.57■□□□□ 0.56
Upf1-202ENSMUST00000215817 Kiaa1107Q80TK0 1369 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Gsdma2Q32M21 443 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Stk11ipQ3TAA7 1072 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Hdac6Q9Z2V5 1149 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Pdcd11Q6NS46 1862 aaKnown RBP18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Ankrd44B2RXR6 993 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 IbspQ61711 324 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Tecpr2Q3UH45 1423 aa18.56■□□□□ 0.56
Upf1-202ENSMUST00000215817 Ltv1Q6NSQ7 470 aaKnown RBP18.55■□□□□ 0.56
Upf1-202ENSMUST00000215817 Qser1A2BIE1 1698 aa18.55■□□□□ 0.56
Upf1-202ENSMUST00000215817 Prl7d1P04769 244 aa18.55■□□□□ 0.56
Upf1-202ENSMUST00000215817 PigbQ9JJQ0 542 aa18.55■□□□□ 0.56
Upf1-202ENSMUST00000215817 Hmgb2P30681 210 aaKnown RBP18.55■□□□□ 0.56
Upf1-202ENSMUST00000215817 Rreb1Q3UH06 1700 aaKnown RBP18.54■□□□□ 0.56
Upf1-202ENSMUST00000215817 Lrrc43Q3V0L5 667 aa18.54■□□□□ 0.56
Upf1-202ENSMUST00000215817 CgnP59242 1191 aa18.54■□□□□ 0.56
Upf1-202ENSMUST00000215817 Dcaf5Q80T85 946 aa18.54■□□□□ 0.56
Upf1-202ENSMUST00000215817 Kif18aQ91WD7 886 aa18.54■□□□□ 0.56
Upf1-202ENSMUST00000215817 Mcm2P97310 904 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Scaf1Q5U4C3 1256 aaKnown RBP18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Nid2O88322 1403 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Mum1Q6DID5 682 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Grm8P47743 908 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Gm12185Q5NCB2 835 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Agtpbp1Q641K1 1218 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Esco1Q69Z69 843 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Gcc1Q9D4H2 778 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Tex14Q7M6U3 1450 aa18.53■□□□□ 0.56
Upf1-202ENSMUST00000215817 Ccdc129Q14B48 1034 aa18.52■□□□□ 0.56
Upf1-202ENSMUST00000215817 Eif4a1P60843 406 aaKnown RBP18.52■□□□□ 0.56
Upf1-202ENSMUST00000215817 VgfQ0VGU4 617 aa18.52■□□□□ 0.56
Upf1-202ENSMUST00000215817 PhaxQ9JJT9 385 aaKnown RBP18.52■□□□□ 0.56
Upf1-202ENSMUST00000215817 Gm7347D3YYI9 267 aa18.52■□□□□ 0.55
Upf1-202ENSMUST00000215817 Speer4aF8VPX6 267 aa18.52■□□□□ 0.55
Upf1-202ENSMUST00000215817 Cers3Q1A3B0 383 aa18.52■□□□□ 0.55
Upf1-202ENSMUST00000215817 Dctn1O08788 1281 aa18.51■□□□□ 0.55
Upf1-202ENSMUST00000215817 Q4VA45 678 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms