RNA–Protein interactions for RNA: ENSMUST00000203933.2

Firre-206, mousemouse

TSL 1 (best) BASIC

Gene Firre, Length 5,555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Firre-206ENSMUST00000203933 Lmbr1Q9JIT0 490 aa11.71□□□□□ -0.53
Firre-206ENSMUST00000203933 Mrvi1Q9WUX5 899 aaKnown RBP11.71□□□□□ -0.53
Firre-206ENSMUST00000203933 Ces1hD3Z298 562 aa11.71□□□□□ -0.54
Firre-206ENSMUST00000203933 Tfip11Q9ERA6 838 aaKnown RBP11.71□□□□□ -0.54
Firre-206ENSMUST00000203933 Igf2bp2Q5SF07 592 aaKnown RBP11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 AI481877A2ALV5 1481 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Larp1Q6ZQ58 1072 aaKnown RBP11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Frmd3Q8BHD4 595 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Aplp1Q03157 653 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Ccdc39Q9D5Y1 937 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Polr3aB2RXC6 1390 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 Tmco3Q8BH01 678 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 NsmfQ99NF2 532 aa11.7□□□□□ -0.54
Firre-206ENSMUST00000203933 GlmnQ8BZM1 596 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Slc14a2Q8R4T9 930 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Abcd1P48410 736 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Spg7Q3ULF4 781 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Cyp7a1Q64505 503 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Znf18Q810A1 556 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Tmem67Q8BR76 992 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Mapkbp1Q6NS57 1503 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Gapvd1Q6PAR5 1458 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Tmem132eQ6IEE6 982 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Cep55Q8BT07 462 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Nol7Q9D7Z3 254 aaKnown RBP11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 CastP51125 788 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Smarcc1P97496 1104 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Luc7lQ9CYI4 371 aaKnown RBP11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Stxbp4Q9WV89 557 aa11.69□□□□□ -0.54
Firre-206ENSMUST00000203933 Map3k2Q61083 619 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Ccdc172Q810N9 267 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Fam43aQ8BUP8 424 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Pof1bQ8K4L4 587 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Nip7Q9CXK8 180 aaKnown RBP11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Lrrfip2Q91WK0 415 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Ssr1Q9CY50 286 aaKnown RBP11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Ppp1r21Q3TDD9 780 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Gnat3Q3V3I2 354 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Ankle2Q6P1H6 964 aa11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Ythdc2B2RR83 1445 aaKnown RBP11.68□□□□□ -0.54
Firre-206ENSMUST00000203933 Znf697Q569E7 569 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Pet2A2AHY8 747 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Q3UPC7 1272 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Nup88Q8CEC0 753 aaKnown RBP11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Nap1l5Q9JJF0 156 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Cwc25Q9DBF7 416 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 IncenpQ9WU62 880 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Gm1043A0A140LJC2 1431 aa11.67□□□□□ -0.54
Firre-206ENSMUST00000203933 Gjb2Q00977 226 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Bag1Q60739 355 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Def6Q8C2K1 630 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 ParvgQ9ERD8 331 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Fancd2Q80V62 1450 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Cfap58B2RW38 873 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Tmem87bQ8BKU8 555 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Gas2l3Q3UWW6 683 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Rbm26Q6NZN0 1012 aaKnown RBP11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Zranb1Q7M760 708 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Adck5Q80V03 582 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Wwc1Q5SXA9 1104 aa11.66□□□□□ -0.54
Firre-206ENSMUST00000203933 Ces1aE9PYP1 563 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Zc3h12cQ5DTV4 884 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 BicraF8VPZ9 1578 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Cpa2Q504N0 417 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Cfap45Q9D9U9 551 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Fam135aQ6NS59 1506 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 ScaperF8VQ70 1398 aaKnown RBP11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Rbm27Q5SFM8 1060 aaKnown RBP11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Lamb3Q61087 1168 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Il1rapl2Q9ERS6 686 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Lrrfip1Q3UZ39 729 aaKnown RBP11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Ccnl1Q52KE7 532 aaKnown RBP11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Cep112Q5PR68 954 aa11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 RarsQ9D0I9 660 aaKnown RBP11.65□□□□□ -0.54
Firre-206ENSMUST00000203933 Rfx7F8VPJ6 1459 aa11.65□□□□□ -0.55
Firre-206ENSMUST00000203933 L3mbtl2P59178 703 aa11.65□□□□□ -0.55
Firre-206ENSMUST00000203933 Rnf41Q8BH75 317 aa11.65□□□□□ -0.55
Firre-206ENSMUST00000203933 Syce3B5KM66 88 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Gimap8Q75N62 688 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Speer4dL7N216 212 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Samm50Q8BGH2 469 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Amotl2Q8K371 772 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Naip7Q9JIB3 1402 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Naip6Q9JIB6 1403 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Izumo3A6PWV3 263 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Ccdc102aQ3TMW1 549 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Cbx1P83917 185 aaKnown RBP11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Emilin2Q8K482 1074 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Plekho1Q9JIY0 408 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Pmfbp1Q9WVQ0 1022 aa11.64□□□□□ -0.55
Firre-206ENSMUST00000203933 Gm7347D3YYI9 267 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Speer4aF8VPX6 267 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Chaf1aQ9QWF0 911 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Bcar3Q9QZK2 820 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 CenphQ9QYM8 241 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Rapgef6Q5NCJ1 1609 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 CalrP14211 416 aaKnown RBP11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Hs1bp3Q3TC93 395 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 Cul5Q9D5V5 780 aa11.63□□□□□ -0.55
Firre-206ENSMUST00000203933 CenpqQ9CPQ5 267 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms