RNA–Protein interactions for RNA: ENSMUST00000188167.1

Gm28955-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28955, Length 2,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28955-201ENSMUST00000188167 Gm21149A0A0G2JFY7 255 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Gm21190A0A0G2JGJ6 266 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Speer4cG3UXD1 256 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Gm17019K7N6W5 255 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Gsto1O09131 240 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Pdia4P08003 638 aaKnown RBP9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Slc4a2P13808 1237 aaKnown RBP9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Zhx1P70121 873 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Dcaf11Q91VU6 549 aa9.67□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Slit3Q9WVB4 1523 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Akap17bA2A3V1 959 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Ccbe1Q3MI99 408 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Cep131Q62036 1060 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Zrsr2Q62377 462 aaKnown RBP9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Trerf1Q8BXJ2 1205 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Sf3a1Q8K4Z5 791 aaKnown RBP9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Sirt1Q923E4 737 aa9.66□□□□□ -0.86
Gm28955-201ENSMUST00000188167 E2f5Q61502 335 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 PdiltQ9DAN1 588 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Fbln2P37889 1221 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Foxd1Q61345 456 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Robo4Q8C310 1012 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Vps53Q8CCB4 832 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Ccdc94Q9D6J3 314 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Arih1Q9Z1K5 555 aa9.65□□□□□ -0.86
Gm28955-201ENSMUST00000188167 Gm21680A0A0G2JGR8 267 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Gm1979E9QAN3 267 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Nkx1-2P42580 305 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Rasa4Q6PFQ7 802 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ercc6lQ8BHK9 1240 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Rpgrip1lQ8CG73 1264 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Topaz1E5FYH1 1653 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Brwd3A2AHJ4 1799 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Kif7B7ZNG0 1348 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Klhl33G3UW92 533 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Gm9758Q80ZT2 255 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Zbtb22Q9Z0G7 638 aa9.64□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Pik3r4Q8VD65 1358 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Neurod6P48986 337 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Eif5P59325 429 aaKnown RBP9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 MpndQ3TV65 487 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Klhl23Q6GQU2 558 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Q8C5K5 320 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Abca14E9Q8F8 1683 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Thrap3Q569Z6 951 aaKnown RBP9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Prdm4Q80V63 803 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Nrbp1Q99J45 535 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Npm3Q9CPP0 175 aaKnown RBP9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Cep83Q9D5R3 692 aa9.63□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Gm7347D3YYI9 267 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Spty2d1Q68FG3 682 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ppp2r1aQ76MZ3 589 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Q7TT23 1179 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Fam177a1Q8BR63 207 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Cluap1Q8R3P7 413 aa9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Scaf11E9PZM7 1456 aaKnown RBP9.62□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Nkx1-1G3UXB3 402 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Hoxa2P31245 372 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Kif11Q6P9P6 1052 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Znf513Q6PD29 541 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 NppbP40753 121 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 U2surpQ6NV83 1029 aaKnown RBP9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Suds3Q8BR65 328 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Cps1Q8C196 1500 aa9.61□□□□□ -0.87
Gm28955-201ENSMUST00000188167 NktrP30415 1453 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ppp4cP97470 307 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Q3UJC8 639 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ferd3lQ923Z4 168 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Nwd1A6H603 1563 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Gm21671G3UY31 267 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Cct2P80314 535 aaKnown RBP9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ppp4r3aQ6P2K6 820 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Pdcl2Q78Y63 240 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Tbx22Q8K402 517 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Gprasp1Q5U4C1 1347 aa9.6□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Kif1cO35071 1100 aaKnown RBP9.59□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Ica1lQ3TY65 431 aa9.59□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Fam117aQ7TNF9 451 aa9.59□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Rab3gap2Q8BMG7 1366 aa9.59□□□□□ -0.87
Gm28955-201ENSMUST00000188167 Zscan21Q07231 555 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Q8C4P0 716 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Get4Q9D1H7 327 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Atg7Q9D906 698 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Spaca1Q9DA48 305 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Sart3Q9JLI8 962 aaKnown RBP9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Map3k19E9Q3S4 1311 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Lmtk3Q5XJV6 1424 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Krt18P05784 423 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 HalP35492 657 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 IqceQ6PCQ0 778 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Lsm14aQ8K2F8 462 aaKnown RBP9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Arap3Q8R5G7 1538 aa9.58□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Ifrd1P19182 449 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Rbm46P86049 533 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Mkrn1Q9QXP6 481 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Rims2Q9EQZ7 1530 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Rimbp3Q3V0F0 1606 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Tcf3P15806 651 aa9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Nol10Q5RJG1 687 aaKnown RBP9.57□□□□□ -0.88
Gm28955-201ENSMUST00000188167 Klra8Q60682 266 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms