RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Lamb3Q61087 1168 aa18.85■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Ift57Q8BXG3 429 aa18.85■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Aplp1Q03157 653 aa18.84■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Erich4Q3UNU4 136 aa18.84■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 TbcaP48428 108 aaKnown RBP18.84■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Ifit1bl2Q3U687 466 aa18.84■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Eif5P59325 429 aaKnown RBP18.83■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Ddb1Q3U1J4 1140 aaKnown RBP18.83■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Ppp4r3bQ922R5 820 aa18.83■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Nup88Q8CEC0 753 aaKnown RBP18.83■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Talpid3E9PV87 1520 aa18.83■□□□□ 0.61
Pcdh1-203ENSMUST00000160721 Cep89Q9CZX2 791 aa18.83■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Cpa2Q504N0 417 aa18.83■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Slc13a4Q8BZ82 625 aa18.83■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Nat10Q8K224 1024 aaKnown RBP18.83■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 MvpQ9EQK5 861 aa18.83■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Trim55G3X8Y1 545 aa18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Ccdc96Q9CR92 584 aa18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 CarsQ9ER72 831 aaKnown RBP18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Chpf2Q3UU43 768 aa18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Maco1Q7TQE6 664 aaKnown RBP18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Nip7Q9CXK8 180 aaKnown RBP18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 IkQ9Z1M8 557 aaKnown RBP18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Abcd1P48410 736 aa18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Cfap69Q8BH53 942 aa18.82■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Gps2Q921N8 327 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Pbrm1Q8BSQ9 1634 aaKnown RBP18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 GpkowQ56A08 488 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Tango6Q8C3S2 1079 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Rhot2Q8JZN7 620 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Sos1Q62245 1319 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Med4Q9CQA5 270 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Txnrd1Q9JMH6 613 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Themis2Q91YX0 663 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Naip5Q9R016 1403 aa18.81■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Hmgb2P30681 210 aaKnown RBP18.8■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Gsdma2Q32M21 443 aa18.8■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Map4k4P97820 1233 aaKnown RBP18.8■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Soga3Q6NZL0 945 aa18.8■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Fsd1Q7TPM6 496 aa18.8■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Ddx17Q501J6 650 aaKnown RBP18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Tspyl2Q7TQI8 677 aa18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Dhx8A2A4P0 1244 aaKnown RBP18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Ccdc181Q80ZU5 509 aa18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Sel1lQ9Z2G6 790 aa18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Cbx1P83917 185 aaKnown RBP18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Larp1Q6ZQ58 1072 aaKnown RBP18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Gnl2Q99LH1 728 aaKnown RBP18.79■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 GptQ8QZR5 496 aa18.78■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Fam43aQ8BUP8 424 aa18.78■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Kdm4aQ8BW72 1064 aa18.78■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Otud6bQ8K2H2 294 aa18.78■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Tubb6Q922F4 447 aa18.78■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Myd88P22366 296 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Erc1Q99MI1 1120 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Cfap58B2RW38 873 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Slu7Q8BHJ9 585 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Phldb2Q8K1N2 1249 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Cep57l1Q8VDS7 400 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Synj2Q9D2G5 1434 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 CenpqQ9CPQ5 267 aa18.77■□□□□ 0.6
Pcdh1-203ENSMUST00000160721 Kif20aP97329 887 aa18.77■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ppip5k2Q6ZQB6 1129 aa18.77■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Znf428Q8C1M2 176 aa18.77■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 SfswapQ3USH5 945 aaKnown RBP18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Top1mtQ8R4U6 593 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 BbxQ8VBW5 907 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 L3mbtl2P59178 703 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Erlin2Q8BFZ9 340 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Fam184aE9PW83 1143 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 RalgapbQ8BQZ4 1484 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Aldh1l1Q8R0Y6 902 aa18.76■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Pip4k2aO70172 405 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Rbm26Q6NZN0 1012 aaKnown RBP18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Efcab2Q9CQ46 164 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Spag5Q7TME2 1165 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Hfm1D3Z4R1 1434 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Rnf187Q8BFX1 236 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Klhdc4Q921I2 584 aa18.75■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Trim25Q61510 634 aaKnown RBP18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Dnajc2P54103 621 aaKnown RBP18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Irf9Q61179 399 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ptpdc1Q6NZK8 747 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Cadps2Q8BYR5 1297 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Gigyf1Q99MR1 1044 aaKnown RBP18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ripk4Q9ERK0 786 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Znf608Q56A10 1511 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Gbp4Q61107 620 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ppp6r1Q7TSI3 856 aa18.74■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Stim1P70302 685 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Plekhm2Q80TQ5 1018 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Cdc45Q9Z1X9 566 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Jdp2P97875 163 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Cfap65Q3V0B4 1847 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 NcapgE9PWG6 1004 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Ddx58Q6Q899 926 aa18.73■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Cyp7a1Q64505 503 aa18.72■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Slc26a8Q8R0C3 999 aa18.72■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Depdc5P61460 1591 aa18.72■□□□□ 0.59
Pcdh1-203ENSMUST00000160721 Map3k2Q61083 619 aa18.72■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms