RNA–Protein interactions for RNA: ENSMUST00000121963.2

Col6a4-201, Transcript of Collagen alpha-4(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a4, Length 7,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4-201ENSMUST00000121963 Efcab5A0JP43 1406 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 NppbP40753 121 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Neurog2P70447 263 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Svs3aF2Z472 265 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Stk11ipQ3TAA7 1072 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Rufy2Q8R4C2 606 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Ipo9Q91YE6 1041 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Cdc45Q9Z1X9 566 aa12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Knop1Q9Z2Q2 478 aaKnown RBP12.78□□□□□ -0.36
Col6a4-201ENSMUST00000121963 WaplQ65Z40 1200 aaKnown RBP12.77□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Secisbp2lQ6A098 1086 aaKnown RBP12.77□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Myd88P22366 296 aa12.77□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Cdc37l1Q9CZP7 335 aa12.77□□□□□ -0.36
Col6a4-201ENSMUST00000121963 Zfp644E9QA22 1323 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Fermt1P59113 677 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 AnlnQ8K298 1121 aaKnown RBP12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Dctn1O08788 1281 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ipo4Q8VI75 1082 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cetn2Q9R1K9 172 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Izumo3A6PWV3 263 aa12.77□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Tsg101Q61187 391 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ctage5Q8R311 779 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Mrpl12Q9DB15 201 aaKnown RBP12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 ItpripQ3TNL8 555 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Zranb1Q7M760 708 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 TnikP83510 1323 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Atp2b4Q6Q477 1205 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 AdpgkQ8VDL4 496 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Znf394Q9Z1D9 521 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Plb1Q3TTY0 1478 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Pnmal2G3X9N3 661 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Chmp6P0C0A3 200 aa12.76□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Trap1aP19473 224 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cc2d1bQ8BRN9 848 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Pus7B7ZNL8 666 aaKnown RBP12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Rrp12Q6P5B0 1295 aaKnown RBP12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Tmx4Q8C0L0 335 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Speer4dL7N216 212 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Efcab2Q9CQ46 164 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Xrcc4Q924T3 326 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Kank1E9Q238 1360 aa12.75□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Sp4Q62445 782 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Taf3Q5HZG4 932 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Prkg1P0C605 671 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Irx3P81067 507 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Sde2Q8K1J5 448 aaKnown RBP12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cwc25Q9DBF7 416 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Mcm2P97310 904 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Rpgrip1lQ8CG73 1264 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Traf3ip1Q149C2 625 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cep55Q8BT07 462 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Rbm17Q8JZX4 405 aaKnown RBP12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Slc26a8Q8R0C3 999 aa12.74□□□□□ -0.37
Col6a4-201ENSMUST00000121963 DesP31001 469 aaKnown RBP12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 CenphQ9QYM8 241 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Rnf214Q8BFU3 668 aaKnown RBP12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Rab3il1Q8VDV3 383 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Lman1Q9D0F3 517 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 NefhP19246 1090 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Mpp4Q6P7F1 635 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Letm1Q9Z2I0 738 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ankrd36D3Z4K0 1415 aa12.73□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Jakmip1Q8BVL9 626 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cfap53Q9D439 514 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Irf9Q61179 399 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ctnna2Q61301 953 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Frmpd2A0A140LI67 1392 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Irgm2A0A140LIF8 407 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Myl6bQ8CI43 207 aa12.72□□□□□ -0.37
Col6a4-201ENSMUST00000121963 SkilQ60665 675 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ctnnbl1Q9CWL8 563 aaKnown RBP12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Plekho1Q9JIY0 408 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ccdc173A0JLY1 547 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Grm1P97772 1199 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Soga3Q6NZL0 945 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Ivns1abpQ920Q8 642 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 2310002L09RikQ9D7L5 217 aa12.71□□□□□ -0.37
Col6a4-201ENSMUST00000121963 Cbx1P83917 185 aaKnown RBP12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Cep112Q5PR68 954 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Mum1Q6DID5 682 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Eno4Q8C042 619 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Dusp27Q148W8 1138 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 KarsQ99MN1 595 aaKnown RBP12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Vti1aO89116 217 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Eme2Q56A04 373 aa12.71□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Rnf41Q8BH75 317 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Brf1Q8CFK2 676 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 ParnQ8VDG3 624 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 CenpqQ9CPQ5 267 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Zfp42P22227 288 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Dact3Q0PHV7 610 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Ces5aQ6AW46 575 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Klhl34A2AI76 644 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Ddx10Q80Y44 875 aaKnown RBP12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Def6Q8C2K1 630 aa12.7□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Ccar2Q8VDP4 922 aaKnown RBP12.69□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Tubb6Q922F4 447 aa12.69□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Fbf1A2A870 1173 aa12.69□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Slc52a2Q9D8F3 450 aa12.69□□□□□ -0.38
Col6a4-201ENSMUST00000121963 Speer3W4VSP1 261 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms