RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Ttc21aQ8C0S4 1314 aa12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Ice2Q3UZ18 988 aaKnown RBP12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Ano6Q6P9J9 911 aa12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Ccar2Q8VDP4 922 aaKnown RBP12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Qser1A2BIE1 1698 aa12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Anp32eP97822 260 aaKnown RBP12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Zscan22Q8BGS5 496 aa12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Os9Q8K2C7 672 aa12.17□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Phactr2B1AVP0 632 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Filip1lQ6P6L0 1131 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 EcsitQ9QZH6 435 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Neurl4Q5NCX5 1563 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Zkscan7E9PVW1 718 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Mrps27Q8BK72 415 aaKnown RBP12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Naip7Q9JIB3 1402 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Psme1P97371 249 aa12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Fam208aQ69ZR9 1610 aaKnown RBP12.16□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Usp25P57080 1055 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 U2surpQ6NV83 1029 aaKnown RBP12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Gli2Q0VGT2 1544 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Sf3a1Q8K4Z5 791 aaKnown RBP12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 FanclQ9CR14 375 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Ms4a1P19437 291 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Zkscan4Q5SZT6 480 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Cgnl1Q6AW69 1298 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Tsen2Q6P7W5 460 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Zbtb22Q9Z0G7 638 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Pola1P33609 1465 aa12.15□□□□□ -0.46
Ctc1-202ENSMUST00000116359 Ccdc162pQ0VG85 912 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Mum1Q6DID5 682 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Gm11983V9GXS8 105 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Cdc42bpaQ3UU96 1719 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Rtf1A2AQ19 715 aaKnown RBP12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Cfap157Q0VFX2 523 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Eif4g2Q62448 906 aaKnown RBP12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ccdc171E9Q1U1 1324 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Kif24Q6NWW5 1356 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Med4Q9CQA5 270 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Myo1cQ9WTI7 1063 aa12.14□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Klra1P20937 262 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Frat1P70339 274 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Q3UPC7 1272 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Nol10Q5RJG1 687 aaKnown RBP12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Sparcl1P70663 650 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Pde4cQ3UEI1 686 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Q9D2X8 372 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Tpm1P58771 284 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ube2hP62257 183 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 EappQ5BU09 281 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Bicd2Q921C5 820 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Creld2Q9CYA0 350 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Add3Q9QYB5 706 aaKnown RBP12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Golga5Q9QYE6 729 aa12.13□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Psen1P49769 467 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Pmfbp1Q9WVQ0 1022 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Rfc1P35601 1131 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Fmnl2A2APV2 1086 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 CalcaP70160 136 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Smarca5Q91ZW3 1051 aaKnown RBP12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Odf2lQ9D478 642 aa12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Znf518aB2RRF6 1478 aaKnown RBP12.12□□□□□ -0.47
Ctc1-202ENSMUST00000116359 AW822073A0A0N4SUK1 652 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Babam1Q3UI43 333 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Znf532Q6NXK2 1036 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Polr3gQ6NXY9 223 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Erc2Q6PH08 957 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ccdc178Q8CDV0 866 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 MycbpQ9EQS3 103 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Exoc6bA6H5Z3 810 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ankrd44B2RXR6 993 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Aldh8a1Q8BH00 487 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Aldh1l1Q8R0Y6 902 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 EvcP57680 1005 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Paxbp1P58501 919 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Wdr93Q402B2 695 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Nfe2l3Q9WTM4 660 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Gprasp1Q5U4C1 1347 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ankrd50F7BE84 1390 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Atp2b1G5E829 1220 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Smarce1O54941 411 aaKnown RBP12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 RereQ80TZ9 1558 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Tlcd1Q99JT6 247 aa12.11□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Pnpla2Q8BJ56 486 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Gtf2e1Q9D0D5 440 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Senp3Q9EP97 568 aaKnown RBP12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Atp6v1dP57746 247 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Plekhm2Q80TQ5 1018 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Gcc1Q9D4H2 778 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Myom1Q62234 1667 aaKnown RBP12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Tulp4Q9JIL5 1547 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Hspa1lP16627 641 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Spag5Q7TME2 1165 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Wdr24Q8CFJ9 790 aa12.1□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Ssh2Q5SW75 1423 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Fbln2P37889 1221 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Arid5bQ8BM75 1188 aaKnown RBP12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Rapgef3Q8VCC8 918 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Chaf1aQ9QWF0 911 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 4930407I10RikD3Z5T8 1512 aa12.09□□□□□ -0.47
Ctc1-202ENSMUST00000116359 Recql4Q75NR7 1216 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms