RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Abcc12Q80WJ6 1366 aa16.34■□□□□ 0.21
Ccdc28b-202ENSMUST00000106035 U2af1Q9D883 239 aaKnown RBP16.33■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 AceP09470 1312 aa16.33■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Kndc1Q0KK55 1742 aa16.33■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Plch1Q4KWH5 1682 aa16.32■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Zcwpw1Q6IR42 630 aa16.32■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Ppm1fQ8CGA0 452 aa16.32■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 C4bP01029 1738 aa16.31■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Snap23O09044 210 aa16.3■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Igf2rQ07113 2483 aaKnown RBP16.3■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Tgfb2P27090 414 aa16.29■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Amhr2Q8K592 568 aa16.29■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Efcab2Q9CQ46 164 aa16.29■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Cabp2Q9JLK4 216 aa16.29■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Q4VA45 678 aa16.28■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 Mylk2Q8VCR8 613 aa16.28■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 CpzQ8R4V4 654 aa16.27■□□□□ 0.2
Ccdc28b-202ENSMUST00000106035 ScaperF8VQ70 1398 aaKnown RBP16.26■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Col11a2Q64739 1736 aa16.26■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Tiam2Q6ZPF3 1715 aa16.26■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Camkk2Q8C078 588 aa16.26■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 HmcesQ8R1M0 353 aaKnown RBP16.26■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Rtf1A2AQ19 715 aaKnown RBP16.25■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Cfap70D3YVL2 1141 aa16.25■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Kcnn1Q9EQR3 537 aa16.25■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Anp32bQ9EST5 272 aaKnown RBP16.25■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Cers3Q1A3B0 383 aa16.24■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 1810065E05RikQ5NC41 235 aa16.24■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Rnaseh2aQ9CWY8 301 aa16.24■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Tlr8P58682 1032 aa16.23■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Dpf1Q9QX66 387 aa16.23■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Btbd11Q6GQW0 1109 aa16.22■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Syde2E9PUP1 1314 aa16.21■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Gpr162Q3UN16 588 aa16.21■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 PigbQ9JJQ0 542 aa16.21■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 MetP16056 1379 aa16.21■□□□□ 0.19
Ccdc28b-202ENSMUST00000106035 Nav1Q8CH77 1875 aa16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Tcerg1Q8CGF7 1100 aaKnown RBP16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 SnrkQ8VDU5 748 aa16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Taf1dQ9D4V4 322 aa16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Slc34a2Q9DBP0 697 aa16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Usp19Q3UJD6 1360 aa16.2■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Prr29B1ARI9 187 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Wdhd1P59328 1117 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Atp1b3P97370 278 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Yy1Q00899 414 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Rbm26Q6NZN0 1012 aaKnown RBP16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Zbtb1Q91VL9 713 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Myo5bP21271 1818 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Atf7ipQ7TT18 1306 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Ubn2Q80WC1 1314 aa16.19■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Gm12185Q5NCB2 835 aa16.18■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Clcn1Q64347 994 aa16.18■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Q7TT23 1179 aa16.18■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Slfnl1Q8BHW9 410 aa16.18■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Togaram1Q6A070 1776 aaKnown RBP16.18■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Znf541Q0GGX2 1363 aa16.17■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Cyp2c67Q569X9 491 aa16.17■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Srp68Q8BMA6 625 aaKnown RBP16.17■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Nip7Q9CXK8 180 aaKnown RBP16.17■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Apaf1O88879 1249 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Iqsec3Q3TES0 1195 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Rpgrip1lQ8CG73 1264 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Flad1Q8R123 492 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Trip6Q9Z1Y4 480 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Aebp2Q9Z248 504 aaKnown RBP16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Mapk8ip3Q9ESN9 1337 aa16.16■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Cyp2c69E9PXC3 491 aa16.15■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Cyp2c40P56657 491 aa16.15■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 FktnQ8R507 461 aa16.15■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Gigyf1Q99MR1 1044 aaKnown RBP16.15■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Nsfl1cQ9CZ44 370 aaKnown RBP16.15■□□□□ 0.18
Ccdc28b-202ENSMUST00000106035 Casz1Q9CWL2 1761 aa16.14■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Adgre1Q61549 931 aa16.14■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 TefQ9JLC6 301 aa16.14■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 StrcQ8VIM6 1809 aa16.13■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Prdm11A2AGX3 565 aa16.13■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Prr5lA2AVJ5 370 aa16.13■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Ambra1A2AH22 1300 aa16.13■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Prim1P20664 417 aa16.12■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 IarsQ8BU30 1262 aa16.12■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Tango6Q8C3S2 1079 aa16.12■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Spon1Q8VCC9 807 aa16.12■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Rapgef4Q9EQZ6 1011 aa16.12■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Cavin4A2AMM0 362 aa16.11■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Cnnm1Q0GA42 951 aa16.11■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 CastP51125 788 aa16.1■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Map4k4P97820 1233 aaKnown RBP16.1■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Lmnb1P14733 588 aaKnown RBP16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Eif4a1P60843 406 aaKnown RBP16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Snai1Q02085 264 aa16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Ggnbp2Q5SV77 696 aa16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Tktl2Q9D4D4 627 aa16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Swt1Q9DBQ9 907 aa16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Col1a2Q01149 1372 aa16.09■□□□□ 0.17
Ccdc28b-202ENSMUST00000106035 Nedd4P46935 887 aaKnown RBP16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 TrhQ62361 256 aa16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Esco1Q69Z69 843 aa16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Prkab2Q6PAM0 271 aa16.08■□□□□ 0.16
Ccdc28b-202ENSMUST00000106035 Pdia6Q922R8 440 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms