RNA–Protein interactions for RNA: ENSMUST00000087241.6

Shisa3-201, Transcript of Protein shisa-3 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shisa3, Length 3,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3-201ENSMUST00000087241 CtcfQ61164 736 aaKnown RBP15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Gm32742A0A1B0GT42 1604 aa15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Col17a1Q07563 1470 aa15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Srgap3Q812A2 1099 aa15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Wdr3Q8BHB4 942 aaKnown RBP15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Zeb2Q9R0G7 1215 aa15.6■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Gjb2Q00977 226 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Q8BT18 775 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Abcc1O35379 1528 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Pdia3P27773 505 aaKnown RBP15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Map4k4P97820 1233 aaKnown RBP15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Sox12Q04890 314 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Gnl2Q99LH1 728 aaKnown RBP15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Gcc1Q9D4H2 778 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Slx4ipQ9D7Y9 413 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Ggnbp2Q5SV77 696 aa15.59■□□□□ 0.09
Shisa3-201ENSMUST00000087241 MpripP97434 1024 aa15.58■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Trerf1Q8BXJ2 1205 aa15.58■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Stk31Q99MW1 1018 aa15.58■□□□□ 0.09
Shisa3-201ENSMUST00000087241 Ccdc34Q3UI66 367 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Arglu1Q3UL36 271 aaKnown RBP15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Slu7Q8BHJ9 585 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Tpm3-rs7D3Z2H9 248 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Prkar2bP31324 416 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Bcl2l13P59017 434 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ptpdc1Q6NZK8 747 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Pnpla2Q8BJ56 486 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Klhdc4Q921I2 584 aa15.58■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Rrbp1Q99PL5 1605 aaKnown RBP15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Gnai1B2RSH2 354 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cdc37l1Q9CZP7 335 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Gnai3Q9DC51 354 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Stx6Q9JKK1 255 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cep170Q6A065 1588 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Lamb3Q61087 1168 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Tpm4Q6IRU2 248 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Fez2Q6TYB5 348 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Gpatch3Q8BIY1 525 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Aldh1l1Q8R0Y6 902 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Nrbp1Q99J45 535 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cyp27a1Q9DBG1 533 aa15.57■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ythdc2B2RR83 1445 aaKnown RBP15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Myo3aQ8K3H5 1613 aa15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ubxn4Q8VCH8 506 aa15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 IbtkQ6ZPR6 1352 aaKnown RBP15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Exoc8Q6PGF7 716 aa15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 PalmQ9Z0P4 383 aa15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cdc42bpbQ7TT50 1713 aa15.56■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ncbp1Q3UYV9 790 aaKnown RBP15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Trim27Q62158 513 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Sv2bQ8BG39 683 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Rab11fip3Q8CHD8 1047 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Nphp1Q9QY53 687 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Zrsr2Q62377 462 aaKnown RBP15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Mcm10Q0VBD2 885 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cfap74Q3UY96 1578 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Setd1aE9PYH6 1716 aa15.55■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Zswim4Q8C7B8 1101 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Kif1bQ60575 1816 aaKnown RBP15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ccdc171E9Q1U1 1324 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Neurod6P48986 337 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ube2hP62257 183 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Mcm2P97310 904 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Map3k13Q1HKZ5 959 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Rec8Q8C5S7 591 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Snw1Q9CSN1 536 aaKnown RBP15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cfdp1O88271 295 aaKnown RBP15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Slc12a5Q91V14 1138 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ndufa8Q9DCJ5 172 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Syt10Q9R0N4 523 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Krt85Q9Z2T6 507 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ttc41Q692V3 1318 aa15.54■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Pnma3Q8JZW8 466 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Atp2b1G5E829 1220 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Fnbp4Q6ZQ03 1031 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Frat2Q8K025 231 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Zkscan5Q9Z1D8 819 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Rassf4Q8CB96 322 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Lonp2Q9DBN5 852 aa15.53■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cfap58B2RW38 873 aa15.52■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Ddit3P35639 168 aa15.52■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Bag1Q60739 355 aa15.52■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Prune1Q8BIW1 454 aa15.52■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Cdk19Q8BWD8 501 aa15.52■□□□□ 0.08
Shisa3-201ENSMUST00000087241 Tex13c2A0A0G2JGA3 530 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Gm45015A0A140LII9 184 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Gm18336A0A140LIU8 765 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Zkscan16A2ALW2 728 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Nucb1Q02819 459 aaKnown RBP15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Nol11Q8BJW5 723 aaKnown RBP15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Maats1Q8BRC6 783 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Gm3409A0A0G2JE67 319 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 DonsonQ9QXP4 560 aa15.52■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Gas2l3Q3UWW6 683 aa15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Wwc1Q5SXA9 1104 aa15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Kif2cQ922S8 721 aa15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Btn2a2A4QPC6 514 aa15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Gsto1O09131 240 aa15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 MlecQ6ZQI3 291 aaKnown RBP15.51■□□□□ 0.07
Shisa3-201ENSMUST00000087241 Dhx8A2A4P0 1244 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms