RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Cabp2Q9JLK4 216 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Abca5Q8K448 1642 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ift57Q8BXG3 429 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Atf7ipQ7TT18 1306 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 A0A0U1RNP2 1173 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Irgm2A0A140LIF8 407 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Mipol1Q9D9F8 279 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Thoc2B1AZI6 1594 aaKnown RBP12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Stx1aO35526 288 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Naip5Q9R016 1403 aa12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Ktn1Q61595 1327 aaKnown RBP12.15□□□□□ -0.46
Scn8a-201ENSMUST00000082209 Pde4dQ01063 747 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gnl2Q99LH1 728 aaKnown RBP12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ttc21bQ0HA38 1315 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Setd1aE9PYH6 1716 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ddx58Q6Q899 926 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Rapgef4Q9EQZ6 1011 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Smco2Q9DA21 347 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Knop1Q9Z2Q2 478 aaKnown RBP12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 PtprkP35822 1457 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Mast1Q9R1L5 1570 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Pms1Q8K119 917 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Fmn2Q9JL04 1578 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Maats1Q8BRC6 783 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Calml4Q91WQ9 153 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ak9G3UYQ4 1894 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Mapk8ip1Q9WVI9 707 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Mapkbp1Q6NS57 1503 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 DesP31001 469 aaKnown RBP12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Tmem87bQ8BKU8 555 aa12.14□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Fam13aQ8BGI4 693 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ccdc150Q8CDI7 1110 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Syce3B5KM66 88 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 LyarQ08288 388 aaKnown RBP12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ccdc181Q80ZU5 509 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Mtmr3Q8K296 1196 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Tubb5P99024 444 aaKnown RBP12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Fmnl3Q6ZPF4 1028 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Iqca1Q9CUL5 857 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Fam135bQ9DAI6 1403 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 PalmQ9Z0P4 383 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 MpripP97434 1024 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Nol8Q3UHX0 1147 aaKnown RBP12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Smc1bQ920F6 1248 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Tacc1Q6Y685 774 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Maco1Q7TQE6 664 aaKnown RBP12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gm21698A0A087WQP8 267 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Nucb2P81117 420 aa12.13□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Nlrp3Q8R4B8 1033 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Luzp1Q8R4U7 1068 aaKnown RBP12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Adcy10Q8C0T9 1614 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 HnrnpmQ9D0E1 729 aaKnown RBP12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 FosbP13346 338 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ecm2Q5FW85 670 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Vps36Q91XD6 386 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 StambpQ9CQ26 424 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Rad23bP54728 416 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ehbp1Q69ZW3 1231 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Abl1P00520 1123 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Nol12Q8BG17 217 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Api5O35841 504 aaKnown RBP12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Mcm4P49717 862 aa12.12□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Cetn1P41209 172 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Wdhd1P59328 1117 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Slc7a3P70423 618 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 TmpoQ61033 693 aaKnown RBP12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Spty2d1Q68FG3 682 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Plb1Q3TTY0 1478 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 BC005561E9Q5E2 1589 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gm21680A0A0G2JGR8 267 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 CenphQ9QYM8 241 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Sf3b2Q3UJB0 878 aaKnown RBP12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Nol7Q9D7Z3 254 aaKnown RBP12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ncapg2Q6DFV1 1138 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Spg7Q3ULF4 781 aa12.11□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ttc12Q8BW49 704 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Brf1Q8CFK2 676 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Tspyl3Q3UYP3 334 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Spata24Q6P926 205 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 InsrP15208 1372 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gm21663A0A0G2JE01 267 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 5031410I06RikE9Q4E0 267 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gm5862K7N5V5 267 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gm10220K7N660 267 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Limch1Q3UH68 1057 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Tbc1d32Q3URV1 1296 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Bloc1s2Q9CWG9 143 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Neo1P97798 1493 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Fkbp4P30416 458 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Dydc1Q9D9T0 175 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Gse1Q3U3C9 1213 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Atf7Q8R0S1 413 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Rcan3Q9JKK0 239 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Arhgef18Q6P9R4 1021 aa12.1□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Jakmip3Q5DTN8 844 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Krt23Q99PS0 422 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Traf3ip1Q149C2 625 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Ttc21aQ8C0S4 1314 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Cfap157Q0VFX2 523 aa12.09□□□□□ -0.47
Scn8a-201ENSMUST00000082209 Hspa4Q61316 841 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms