RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Mad1l1Q9WTX8 717 aaKnown RBP13.4□□□□□ -0.26
Pcdhb17-201ENSMUST00000053856 Zkscan1Q8BGS3 561 aaKnown RBP13.4□□□□□ -0.26
Pcdhb17-201ENSMUST00000053856 Skint5A7XUY5 1461 aa13.4□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Prrc2bQ7TPM1 1486 aaKnown RBP13.4□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 PalldQ9ET54 1408 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Morc2aQ69ZX6 1030 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Fez1Q8K0X8 392 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ces1aE9PYP1 563 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Cavin2Q63918 418 aaKnown RBP13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Slc12a5Q91V14 1138 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Fmn2Q9JL04 1578 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Stim1P70302 685 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Zc3h12cQ5DTV4 884 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Vps37dQ810I0 261 aa13.39□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ncoa1P70365 1447 aa13.38□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Cpsf1Q9EPU4 1441 aaKnown RBP13.38□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ftsj3Q9DBE9 838 aaKnown RBP13.38□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Taf7Q9R1C0 341 aa13.38□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Atf7ipQ7TT18 1306 aa13.38□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ddx46Q569Z5 1032 aaKnown RBP13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Fsd2Q8BZ52 692 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Lrrc45Q8CIM1 670 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Cep57l1Q8VDS7 400 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Pde3aQ9Z0X4 1141 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Col17a1Q07563 1470 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Jdp2P97875 163 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 AidaQ8C4Q6 305 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Sptbn5F6UCX4 1208 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Pnmal2G3X9N3 661 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Anp32eP97822 260 aaKnown RBP13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Klf15Q9EPW2 415 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Stk3Q9JI10 497 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Palm3A2TJV2 734 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Myo1bP46735 1107 aa13.37□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Lrrc9Q8CDN9 1456 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Luc7lQ9CYI4 371 aaKnown RBP13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Plch2A2AP18 1501 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Kif3cO35066 796 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Hdac9Q99N13 588 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 IkQ9Z1M8 557 aaKnown RBP13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Usp48Q3V0C5 1052 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Soga3Q6NZL0 945 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ssh1Q76I79 1042 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ppp6r1Q7TSI3 856 aa13.36□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Stk11ipQ3TAA7 1072 aa13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Znhit6Q3UFB2 460 aaKnown RBP13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Tmem266Q8BZB3 538 aa13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ccdc172Q810N9 267 aa13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 GpkowQ56A08 488 aa13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 CarsQ9ER72 831 aaKnown RBP13.35□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Fam13bQ8K2H3 851 aa13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Olr1Q9EQ09 363 aa13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Plekhm2Q80TQ5 1018 aa13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 InhbeO08717 350 aa13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Hnrnpul1Q8VDM6 859 aaKnown RBP13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Stk38Q91VJ4 465 aa13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Rbm10Q99KG3 930 aaKnown RBP13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Ncbp3Q8BZR9 615 aaKnown RBP13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Bag3Q9JLV1 577 aaKnown RBP13.34□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Atp2b4Q6Q477 1205 aa13.33□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 ParvgQ9ERD8 331 aa13.33□□□□□ -0.27
Pcdhb17-201ENSMUST00000053856 Pik3r4Q8VD65 1358 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Ptpdc1Q6NZK8 747 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Abcc6Q9R1S7 1498 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 GlmnQ8BZM1 596 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Cog6Q8R3I3 657 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Gcom1E9PZ54 550 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Cdkn1cP49919 348 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 L3mbtl2P59178 703 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 MyzapQ3UIJ9 466 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Znf18Q810A1 556 aa13.33□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Kdm3bQ6ZPY7 1562 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Prdm11A2AGX3 565 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Strn4P58404 760 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Cdan1Q8CC12 1239 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Kif18aQ91WD7 886 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Sbno1Q689Z5 1390 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 NapbP28663 298 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Traf3ip1Q149C2 625 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Amotl2Q8K371 772 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Slc26a8Q8R0C3 999 aa13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Zrsr2Q62377 462 aaKnown RBP13.32□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Armc3A2AU72 881 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Ppp4r3aQ6P2K6 820 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Erich3F6QRE9 1637 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Irgm2A0A140LIF8 407 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Rufy2Q8R4C2 606 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 RtcbQ99LF4 505 aaKnown RBP13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Nip7Q9CXK8 180 aaKnown RBP13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Mrpl12Q9DB15 201 aaKnown RBP13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Fam160b2Q80YR2 744 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Lrrc59Q922Q8 307 aaKnown RBP13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Rrs1Q9CYH6 365 aaKnown RBP13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Mns1Q61884 491 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Slain2Q8CI08 581 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Paf1Q8K2T8 535 aa13.31□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Gtf2f1Q3THK3 508 aaKnown RBP13.3□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Ccnl1Q52KE7 532 aaKnown RBP13.3□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 ThemisQ8BGW0 636 aa13.3□□□□□ -0.28
Pcdhb17-201ENSMUST00000053856 Cul5Q9D5V5 780 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms