RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 AnlnQ8K298 1121 aaKnown RBP16.31■□□□□ 0.2
Nup88-201ENSMUST00000035283 Jakmip1Q8BVL9 626 aa16.31■□□□□ 0.2
Nup88-201ENSMUST00000035283 Mmp8O70138 465 aa16.3■□□□□ 0.2
Nup88-201ENSMUST00000035283 Ccne1Q61457 408 aa16.3■□□□□ 0.2
Nup88-201ENSMUST00000035283 Olfml1Q8BSH2 233 aa16.3■□□□□ 0.2
Nup88-201ENSMUST00000035283 Naa30Q8CES0 364 aa16.3■□□□□ 0.2
Nup88-201ENSMUST00000035283 Sytl4Q9R0Q1 673 aa16.3■□□□□ 0.2
Nup88-201ENSMUST00000035283 Glipr1l2Q9CQ35 332 aa16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 IghaA0A0A6YXW6 389 aa16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 Tpx2A2APB8 745 aaKnown RBP16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 MccE9PWI3 1003 aa16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 Cwc27Q3TKY6 469 aa16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 Pmfbp1Q9WVQ0 1022 aa16.29■□□□□ 0.2
Nup88-201ENSMUST00000035283 Anp32cQ64G17 123 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Slx4ipQ9D7Y9 413 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Elmsan1E9Q2I4 1089 aaKnown RBP16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Psme1P97371 249 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Pdzrn3Q69ZS0 1063 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Tet3Q8BG87 1668 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Ercc6l2Q9JIM3 1537 aa16.28■□□□□ 0.2
Nup88-201ENSMUST00000035283 Atp6v1dP57746 247 aa16.27■□□□□ 0.19
Nup88-201ENSMUST00000035283 Nom1Q3UFM5 854 aaKnown RBP16.27■□□□□ 0.19
Nup88-201ENSMUST00000035283 Anapc15P60007 132 aa16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 Atp8b2P98199 1209 aa16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 Gemin5Q8BX17 1502 aaKnown RBP16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 Q3TQI7 289 aaKnown RBP16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 Txndc2Q6P902 515 aa16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 Cdk12Q14AX6 1484 aaKnown RBP16.26■□□□□ 0.19
Nup88-201ENSMUST00000035283 NcapgE9PWG6 1004 aa16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Bach2P97303 839 aa16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Gm156Q58A37 223 aa16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Utp18Q5SSI6 552 aaKnown RBP16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Unc5clQ6R653 518 aa16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Ccar2Q8VDP4 922 aaKnown RBP16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 Mlh1Q9JK91 760 aa16.25■□□□□ 0.19
Nup88-201ENSMUST00000035283 PzpQ61838 1495 aa16.24■□□□□ 0.19
Nup88-201ENSMUST00000035283 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.24■□□□□ 0.19
Nup88-201ENSMUST00000035283 Ms4a2P20490 235 aa16.24■□□□□ 0.19
Nup88-201ENSMUST00000035283 Bms1Q6PGF5 1284 aaKnown RBP16.24■□□□□ 0.19
Nup88-201ENSMUST00000035283 HnrnpmQ9D0E1 729 aaKnown RBP16.24■□□□□ 0.19
Nup88-201ENSMUST00000035283 Mcmdc2E9Q956 681 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 KinQ8K339 391 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Gys2Q8VCB3 704 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Chrna2Q91X60 512 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Ccdc7Q9D541 371 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Tnnt1O88346 262 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Pcmtd1P59913 357 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Pof1bQ8K4L4 587 aa16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 Msh6P54276 1358 aaKnown RBP16.23■□□□□ 0.19
Nup88-201ENSMUST00000035283 EappQ5BU09 281 aa16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 Samm50Q8BGH2 469 aa16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 DpydQ8CHR6 1025 aa16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 Stk3Q9JI10 497 aa16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 Smarce1O54941 411 aaKnown RBP16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 Tbc1d30Q69ZT9 766 aa16.22■□□□□ 0.19
Nup88-201ENSMUST00000035283 Zfp804bA0A0G2JGH6 1343 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Pik3c2bE9QAN8 1632 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Wdr78E9PYY5 807 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Strn4P58404 760 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Adcy5P84309 1262 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Eya1P97767 591 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Casc1Q6TDU8 730 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Rps6ka5Q8C050 863 aa16.21■□□□□ 0.19
Nup88-201ENSMUST00000035283 Babam1Q3UI43 333 aa16.21■□□□□ 0.18
Nup88-201ENSMUST00000035283 Ddx19aQ61655 478 aaKnown RBP16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Cyp2d12Q8BVD2 504 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Med1Q925J9 1575 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Irx6Q9ER75 438 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Disp3A3KFU9 1347 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Dip2aQ8BWT5 1523 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Astn2Q80Z10 1352 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 F2rP30558 430 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Bach1P97302 739 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 Rufy3Q9D394 469 aa16.2■□□□□ 0.18
Nup88-201ENSMUST00000035283 FancaQ9JL70 1439 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Mcm3P25206 812 aaKnown RBP16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Gjb2Q00977 226 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Ints3Q7TPD0 1041 aaKnown RBP16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Foxp4Q9DBY0 795 aaKnown RBP16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Mx2Q9WVP9 655 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Frmpd2A0A140LI67 1392 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Parp14Q2EMV9 1817 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Ccdc173A0JLY1 547 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Zfp51Q3U4L8 781 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Zfp91Q62511 572 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Tbc1d31Q6NXY1 996 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Zbtb22Q9Z0G7 638 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Stk36Q69ZM6 1316 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Nckap5lQ6GQX2 1323 aa16.19■□□□□ 0.18
Nup88-201ENSMUST00000035283 Cyp2d11P24457 504 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Chpf2Q3UU43 768 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Ncbp1Q3UYV9 790 aaKnown RBP16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Wdr93Q402B2 695 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Pabpn1Q8CCS6 302 aaKnown RBP16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Lekr1B2RVN1 116 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Ptgs1P22437 602 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Inpp5bQ8K337 993 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Serpina10Q8R121 448 aa16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Noc3lQ8VI84 807 aaKnown RBP16.18■□□□□ 0.18
Nup88-201ENSMUST00000035283 Stx6Q9JKK1 255 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms