RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 TnikP83510 1323 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ccdc93Q7TQK5 629 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Vps37cQ8R105 352 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Ktn1Q61595 1327 aaKnown RBP19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Disp1Q3TDN0 1521 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Mapkbp1Q6NS57 1503 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Kri1Q8VDQ9 704 aaKnown RBP19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Smarca5Q91ZW3 1051 aaKnown RBP19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 OvosQ3UU35 1456 aa19.52■□□□□ 0.72
Col17a1-201ENSMUST00000026045 Rsph10bE9PYQ0 876 aa19.52■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Dhx30Q99PU8 1217 aaKnown RBP19.52■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Prex2Q3LAC4 1598 aa19.52■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Ca8P28651 291 aa19.51■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Irx4Q9QY61 515 aa19.51■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Gys2Q8VCB3 704 aa19.51■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Dhx16G3X8X0 1044 aaKnown RBP19.51■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Calcoco1Q8CGU1 691 aa19.51■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Nol8Q3UHX0 1147 aaKnown RBP19.5■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Chd1lQ9CXF7 900 aa19.5■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Pafah1b1P63005 410 aaKnown RBP19.5■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Wdr7Q920I9 1489 aa19.5■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Ercc6lQ8BHK9 1240 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 TxlnbQ8VBT1 685 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Adgrb2Q8CGM1 1561 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 MpndQ3TV65 487 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Sos1Q62245 1319 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Gm21698A0A087WQP8 267 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Gm21671G3UY31 267 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Ptpdc1Q6NZK8 747 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Zfp397Q7TNK4 527 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Gimap6Q8K349 305 aa19.49■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Erich3F6QRE9 1637 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Zranb1Q7M760 708 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Catsper2A2ARP9 588 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Abcd1P48410 736 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Q3UPC7 1272 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Erlin1Q91X78 346 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Rbm33Q9CXK9 1231 aaKnown RBP19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Armc9Q9D2I5 817 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Tbc1d32Q3URV1 1296 aa19.48■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Uspl1Q3ULM6 1089 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Golga5Q9QYE6 729 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Me1P06801 572 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Mug2P28666 1451 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Ercc3P49135 783 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Q3UJC8 639 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Tbc1d8Q9Z1A9 1134 aa19.47■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Noc3lQ8VI84 807 aaKnown RBP19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Smc2Q8CG48 1191 aaKnown RBP19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Mcm10Q0VBD2 885 aa19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Mindy4Q3UQI9 744 aa19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Wwc1Q5SXA9 1104 aa19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Zkscan5Q9Z1D8 819 aa19.46■□□□□ 0.71
Col17a1-201ENSMUST00000026045 Ppp6r1Q7TSI3 856 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Slc13a4Q8BZ82 625 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Akap8Q9DBR0 687 aaKnown RBP19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Clul1Q3ZRW6 464 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Smg7Q5RJH6 1138 aaKnown RBP19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Btbd11Q6GQW0 1109 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ccp110Q7TSH4 1004 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Cep57l1Q8VDS7 400 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Arhgef12Q8R4H2 1543 aaKnown RBP19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Prkar2bP31324 416 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Map2k1P31938 393 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Map3k7clP58500 142 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 IqcgQ80W32 419 aa19.45■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Shroom2A2ALU4 1481 aa19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Mcm5P49718 733 aa19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Abcf1Q6P542 837 aaKnown RBP19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Gnl3lQ6PGG6 577 aaKnown RBP19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ssh2Q5SW75 1423 aa19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ppfibp2O35711 882 aa19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Gtf2f1Q3THK3 508 aaKnown RBP19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Skor1Q8BX46 964 aa19.44■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Cpsf2O35218 782 aaKnown RBP19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Larp1Q6ZQ58 1072 aaKnown RBP19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Aplp1Q03157 653 aa19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Tspyl3Q3UYP3 334 aa19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Tubb6Q922F4 447 aa19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Zbtb22Q9Z0G7 638 aa19.43■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Mis12Q9CY25 206 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Stard3nlQ9DCI3 235 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Capn2O08529 700 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Naa25Q8BWZ3 972 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Top1mtQ8R4U6 593 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Arhgef40Q3UPH7 1517 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Ccdc191J3QQ27 883 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Hs1bp3Q3TC93 395 aa19.42■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Sept6Q9R1T4 434 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 TkfcQ8VC30 578 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Fam76aQ922G2 307 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Kdm5bQ80Y84 1544 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Prpf4bQ61136 1007 aaKnown RBP19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 RalylQ8BTF8 293 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Speer4bQ9D9F7 267 aa19.41■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Plekhd1B2RPU2 505 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Tmx3Q8BXZ1 456 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Duxf3A0A0N4SV92 674 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Cfap157Q0VFX2 523 aa19.4■□□□□ 0.7
Col17a1-201ENSMUST00000026045 Pank2Q3U4S0 443 aa19.4■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms