RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 1700010I14RikQ7TPG0 532 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Maats1Q8BRC6 783 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Lonp2Q9DBN5 852 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Zbtb22Q9Z0G7 638 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Plekhh1Q80TI1 1356 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Nup155Q99P88 1391 aaKnown RBP10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Rock1P70335 1354 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Recql4Q75NR7 1216 aaKnown RBP10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Cdc42bpgQ80UW5 1551 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Tex13c2A0A0G2JGA3 530 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Pnma3Q8JZW8 466 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ccdc39Q9D5Y1 937 aa10.94□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Dip2aQ8BWT5 1523 aa10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Pibf1E9Q6K3 756 aa10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ssh2Q5SW75 1423 aa10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Irx1P81068 480 aa10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Tshz1Q5DTH5 1084 aa10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ddx41Q91VN6 622 aaKnown RBP10.93□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Hfm1D3Z4R1 1434 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Evi5lH3BKQ3 813 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Mtx1P47802 317 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Trak1Q6PD31 939 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Bicd2Q921C5 820 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Paip2Q9D6V8 124 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Talpid3E9PV87 1520 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Adgrb2Q8CGM1 1561 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Frat1P70339 274 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Bach1P97302 739 aa10.92□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Rbm25B2RY56 838 aaKnown RBP10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Sstr3P30935 428 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Usp48Q3V0C5 1052 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Znf653Q6YND2 615 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Nutm1Q8BHP2 1126 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Vps37cQ8R105 352 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Inpp5dQ9ES52 1191 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 ItpripQ3TNL8 555 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Nap1l3Q794H2 544 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Il16O54824 1322 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 3425401B19RikD3Z1D3 1412 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 UacaQ8CGB3 1411 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ano6Q6P9J9 911 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ccdc178Q8CDV0 866 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Kdm2bQ6P1G2 1309 aa10.91□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Fmn2Q9JL04 1578 aa10.9□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ncoa1P70365 1447 aa10.9□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Ttc21bQ0HA38 1315 aa10.9□□□□□ -0.66
Ctc1-201ENSMUST00000021278 NefhP19246 1090 aa10.9□□□□□ -0.66
Ctc1-201ENSMUST00000021278 Gm3409A0A0G2JE67 319 aa10.9□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Fam107bQ3TGF2 131 aa10.9□□□□□ -0.67
Ctc1-201ENSMUST00000021278 B4galnt4Q766D5 1034 aa10.9□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Gdap1l1Q8VE33 370 aa10.9□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ggt6Q6PDE7 497 aa10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Slc20a2Q80UP8 656 aa10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Topaz1E5FYH1 1653 aa10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Chrm1P12657 460 aa10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Snx13Q6PHS6 957 aa10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Pdcd11Q6NS46 1862 aaKnown RBP10.89□□□□□ -0.67
Ctc1-201ENSMUST00000021278 A0A1L1SQF0 893 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Zkscan7E9PVW1 718 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Tom1O88746 492 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 HalP35492 657 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Tmem165P52875 323 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Acbd5Q5XG73 508 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Vil1Q62468 827 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 TrdnE9Q9K5 693 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 NeblQ0II04 452 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ccar2Q8VDP4 922 aaKnown RBP10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 MicalclQ9D5U9 680 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Scaf11E9PZM7 1456 aaKnown RBP10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Rsph10bE9PYQ0 876 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 SkilQ60665 675 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Pmfbp1Q9WVQ0 1022 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Fhod3Q76LL6 1578 aa10.88□□□□□ -0.67
Ctc1-201ENSMUST00000021278 1700019A02RikA0A087WPV9 146 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Nucb1Q02819 459 aaKnown RBP10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Q9D2X8 372 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Akap8Q9DBR0 687 aaKnown RBP10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Cfap73J3QPZ5 306 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Sem1P60897 70 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Adck5Q80V03 582 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Mctp1E9PV86 951 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 L1td1Q587J6 782 aaKnown RBP10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ccdc38Q8CDN8 563 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Swt1Q9DBQ9 907 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Kdm2aP59997 1161 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Erlin2Q8BFZ9 340 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Snw1Q9CSN1 536 aaKnown RBP10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Ipo7Q9EPL8 1038 aaKnown RBP10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 PdcQ9QW08 244 aa10.87□□□□□ -0.67
Ctc1-201ENSMUST00000021278 PnnO35691 725 aaKnown RBP10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Smarce1O54941 411 aaKnown RBP10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Cep83Q9D5R3 692 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 CenpjQ569L8 1344 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Kif3cO35066 796 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Lrriq3Q14DL3 633 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Fmnl3Q6ZPF4 1028 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Iffo2Q8R2V2 512 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Usp54Q8BL06 1588 aaKnown RBP10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 Aplp1Q03157 653 aa10.86□□□□□ -0.67
Ctc1-201ENSMUST00000021278 NexnQ7TPW1 607 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms