Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 CKBP1-201ENST00000565489 1086 ntBASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA6Q9Y5G7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHGA6Q9Y5G7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 KRT8P41-201ENST00000533985 1514 ntBASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA6Q9Y5G7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 LETM1P2-201ENST00000597330 2178 ntBASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 AL031133.1-201ENST00000406807 723 ntBASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA6Q9Y5G7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 AC092647.4-201ENST00000457211 535 ntBASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA6Q9Y5G7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms