Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NECTIN3Q9NQS3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 AC097488.1-201ENST00000507834 756 ntBASIC18■□□□□ 0.47
NECTIN3Q9NQS3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NECTIN3Q9NQS3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 KRT8P9-201ENST00000558927 1449 ntBASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 SLC25A1P4-201ENST00000567977 778 ntBASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 AC073912.3-201ENST00000624414 853 ntBASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.99■□□□□ 0.47
NECTIN3Q9NQS3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 AL390961.4-201ENST00000623958 2535 ntBASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 MMP23A-201ENST00000234610 1017 ntBASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 CRYGFP-201ENST00000418459 633 ntBASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 FITM1-202ENST00000559294 800 ntBASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NECTIN3Q9NQS3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms