Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 TPSP2-201ENST00000561760 610 ntBASIC21.01■□□□□ 0.95
VTA1Q9NP79 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 RN7SL510P-201ENST00000581311 263 ntBASIC21.01■□□□□ 0.95
VTA1Q9NP79 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VTA1Q9NP79 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
VTA1Q9NP79 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VTA1Q9NP79 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21■□□□□ 0.95
VTA1Q9NP79 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21■□□□□ 0.95
VTA1Q9NP79 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 Z83836.1-201ENST00000624605 1642 ntBASIC21■□□□□ 0.95
VTA1Q9NP79 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VTA1Q9NP79 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21■□□□□ 0.95
VTA1Q9NP79 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 AP003733.1-201ENST00000491725 852 ntBASIC20.99■□□□□ 0.95
VTA1Q9NP79 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 AC068587.9-201ENST00000641814 219 ntBASIC20.99■□□□□ 0.95
VTA1Q9NP79 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.99■□□□□ 0.95
VTA1Q9NP79 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VTA1Q9NP79 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 AC005332.3-201ENST00000589904 676 ntBASIC20.98■□□□□ 0.95
VTA1Q9NP79 AL390719.2-201ENST00000606993 987 ntBASIC20.98■□□□□ 0.95
VTA1Q9NP79 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.98■□□□□ 0.95
VTA1Q9NP79 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
VTA1Q9NP79 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms