Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 RPS2P28-201ENST00000314255 741 ntBASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 AP001160.2-201ENST00000596071 487 ntBASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf49Q9H6J7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 AC010327.4-202ENST00000591484 748 ntBASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 AC027601.4-201ENST00000611259 610 ntBASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
C11orf49Q9H6J7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.58■□□□□ 0.89
C11orf49Q9H6J7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.58■□□□□ 0.89
C11orf49Q9H6J7 AL355877.3-201ENST00000622820 899 ntBASIC20.58■□□□□ 0.89
C11orf49Q9H6J7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
C11orf49Q9H6J7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
C11orf49Q9H6J7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C11orf49Q9H6J7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
C11orf49Q9H6J7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
C11orf49Q9H6J7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 RPS8P6-201ENST00000426177 609 ntBASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 AL512353.2-201ENST00000448759 1962 ntBASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 TREX1-205ENST00000625293 1783 ntBASIC20.57■□□□□ 0.88
C11orf49Q9H6J7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AC104109.2-201ENST00000602919 1418 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AC026310.3-201ENST00000625186 2373 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 RPSAP43-201ENST00000402237 625 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 FGFR3P6-201ENST00000457012 610 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AC145285.3-201ENST00000564603 959 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AL356488.2-201ENST00000602755 427 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 FAM197Y3-203ENST00000618346 717 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 KRT89P-201ENST00000620027 1478 ntBASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf49Q9H6J7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms