Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.51■□□□□ 0.87
HIPK3Q9H422 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.51■□□□□ 0.87
HIPK3Q9H422 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
HIPK3Q9H422 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HIPK3Q9H422 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.51■□□□□ 0.87
HIPK3Q9H422 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIPK3Q9H422 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 AL590627.1-203ENST00000421194 1026 ntBASIC20.5■□□□□ 0.87
HIPK3Q9H422 TSPY12P-201ENST00000421279 868 ntBASIC20.5■□□□□ 0.87
HIPK3Q9H422 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 GPR32P1-201ENST00000601788 811 ntBASIC20.5■□□□□ 0.87
HIPK3Q9H422 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.5■□□□□ 0.87
HIPK3Q9H422 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIPK3Q9H422 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 AKR1C7P-201ENST00000305623 895 ntBASIC20.49■□□□□ 0.87
HIPK3Q9H422 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 IGHV3-47-201ENST00000425060 335 ntBASIC20.49■□□□□ 0.87
HIPK3Q9H422 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 AL671883.3-201ENST00000603274 991 ntBASIC20.49■□□□□ 0.87
HIPK3Q9H422 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HIPK3Q9H422 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIPK3Q9H422 AL512353.2-201ENST00000448759 1962 ntBASIC20.48■□□□□ 0.87
HIPK3Q9H422 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 SAPCD2P3-201ENST00000455031 850 ntBASIC20.48■□□□□ 0.87
HIPK3Q9H422 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 AL592071.1-201ENST00000611956 408 ntBASIC20.48■□□□□ 0.87
HIPK3Q9H422 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.48■□□□□ 0.87
HIPK3Q9H422 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIPK3Q9H422 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.48■□□□□ 0.87
HIPK3Q9H422 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms