Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 AL031598.1-201ENST00000561511 1773 ntBASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR1EQ9GZS1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 AC133561.5-201ENST00000635547 218 ntBASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR1EQ9GZS1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
POLR1EQ9GZS1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.02■□□□□ 0.63
POLR1EQ9GZS1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.02■□□□□ 0.63
POLR1EQ9GZS1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLR1EQ9GZS1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.02■□□□□ 0.63
POLR1EQ9GZS1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 ECEL1P2-202ENST00000465689 757 ntBASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 MIR3180-5-201ENST00000583743 153 ntBASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 FAM87A-204ENST00000613235 858 ntBASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR1EQ9GZS1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AC004408.2-201ENST00000623613 2777 ntBASIC19■□□□□ 0.63
POLR1EQ9GZS1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
POLR1EQ9GZS1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR1EQ9GZS1 AL357033.4-201ENST00000617703 1807 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms