Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 UBALD1-205ENST00000590891 2641 ntBASIC15.23■□□□□ 0.03
NKX6-2Q9C056 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NKX6-2Q9C056 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 AC008764.7-201ENST00000593779 1081 ntBASIC15.22■□□□□ 0.03
NKX6-2Q9C056 AC243732.1-201ENST00000612648 864 ntBASIC15.22■□□□□ 0.03
NKX6-2Q9C056 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NKX6-2Q9C056 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 KRT16P6-202ENST00000425692 1426 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 UNC93B3-201ENST00000308076 687 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AC099791.1-201ENST00000416440 715 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AC097381.1-201ENST00000429019 1296 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AC010141.2-201ENST00000452426 721 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 AL355001.2-201ENST00000620617 1191 ntBASIC15.21■□□□□ 0.03
NKX6-2Q9C056 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NKX6-2Q9C056 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NKX6-2Q9C056 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 AC105265.2-201ENST00000467189 838 ntBASIC15.2■□□□□ 0.02
NKX6-2Q9C056 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.2■□□□□ 0.02
NKX6-2Q9C056 AC131281.2-201ENST00000520478 145 ntBASIC15.2■□□□□ 0.02
NKX6-2Q9C056 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms