Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRFN3Q9BTN0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 AP002414.3-201ENST00000589352 1468 ntBASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 AC027612.4-201ENST00000605371 583 ntBASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRFN3Q9BTN0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 AC069262.1-201ENST00000539058 672 ntBASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 AC005225.4-201ENST00000557330 545 ntBASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 AC025062.2-201ENST00000605477 670 ntBASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 TP73-AS1-210ENST00000637775 1455 ntBASIC18.71■□□□□ 0.59
LRFN3Q9BTN0 AL162377.1-201ENST00000618844 1793 ntBASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 KRT8P7-201ENST00000533003 1432 ntBASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 AP005117.1-201ENST00000584346 1413 ntBASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 C20orf181-201ENST00000623918 480 ntBASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 Z92544.3-201ENST00000624747 417 ntBASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRFN3Q9BTN0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 TSEN15P1-201ENST00000423257 515 ntBASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.69■□□□□ 0.58
LRFN3Q9BTN0 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.68■□□□□ 0.58
LRFN3Q9BTN0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN3Q9BTN0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRFN3Q9BTN0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms