Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
USB1Q9BQ65 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.75■□□□□ 0.27
USB1Q9BQ65 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 AL356309.3-201ENST00000624132 1934 ntBASIC16.74■□□□□ 0.27
USB1Q9BQ65 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 AC005521.1-201ENST00000393351 872 ntBASIC16.74■□□□□ 0.27
USB1Q9BQ65 MIR1224-201ENST00000408193 85 ntBASIC16.74■□□□□ 0.27
USB1Q9BQ65 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 AL023803.3-201ENST00000615559 522 ntBASIC16.74■□□□□ 0.27
USB1Q9BQ65 AL590326.2-201ENST00000625139 305 ntBASIC16.74■□□□□ 0.27
USB1Q9BQ65 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
USB1Q9BQ65 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
USB1Q9BQ65 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.73■□□□□ 0.27
USB1Q9BQ65 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 AC092338.2-201ENST00000568827 1415 ntBASIC16.73■□□□□ 0.27
USB1Q9BQ65 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 TERF1P1-201ENST00000311003 1181 ntBASIC16.73■□□□□ 0.27
USB1Q9BQ65 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 BX664615.1-201ENST00000443558 458 ntBASIC16.73■□□□□ 0.27
USB1Q9BQ65 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
USB1Q9BQ65 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 AL133373.2-201ENST00000623187 2828 ntBASIC16.73■□□□□ 0.27
USB1Q9BQ65 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
USB1Q9BQ65 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 AC104417.2-201ENST00000562989 1793 ntBASIC16.72■□□□□ 0.27
USB1Q9BQ65 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 AC132872.1-201ENST00000566986 1195 ntBASIC16.72■□□□□ 0.27
USB1Q9BQ65 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 AL031432.5-201ENST00000641059 760 ntBASIC16.72■□□□□ 0.27
USB1Q9BQ65 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 AC004408.2-201ENST00000623613 2777 ntBASIC16.72■□□□□ 0.27
USB1Q9BQ65 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
USB1Q9BQ65 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.72■□□□□ 0.27
USB1Q9BQ65 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms