Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ABCA3Q99758 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ABCA3Q99758 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25■■□□□ 1.59
ABCA3Q99758 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 FABP5-202ENST00000396359 986 ntTSL 5 BASIC25■■□□□ 1.59
ABCA3Q99758 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC25■■□□□ 1.59
ABCA3Q99758 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25■■□□□ 1.59
ABCA3Q99758 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
ABCA3Q99758 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 AL391422.3-201ENST00000603791 2761 ntBASIC25■■□□□ 1.59
ABCA3Q99758 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
ABCA3Q99758 SCARNA2-201ENST00000458748 420 ntBASIC25■■□□□ 1.59
ABCA3Q99758 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC25■■□□□ 1.59
ABCA3Q99758 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC25■■□□□ 1.59
ABCA3Q99758 AC055717.3-201ENST00000622967 595 ntBASIC25■■□□□ 1.59
ABCA3Q99758 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
ABCA3Q99758 AC006333.2-201ENST00000607957 2099 ntBASIC24.99■■□□□ 1.59
ABCA3Q99758 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ABCA3Q99758 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCA3Q99758 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.99■■□□□ 1.59
ABCA3Q99758 RPL13AP23-201ENST00000480739 586 ntBASIC24.99■■□□□ 1.59
ABCA3Q99758 NMU-202ENST00000505262 693 ntTSL 3 BASIC24.99■■□□□ 1.59
ABCA3Q99758 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.99■■□□□ 1.59
ABCA3Q99758 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.99■■□□□ 1.59
ABCA3Q99758 IRF8-202ENST00000562492 946 ntTSL 3 BASIC24.99■■□□□ 1.59
ABCA3Q99758 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC24.99■■□□□ 1.59
ABCA3Q99758 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
ABCA3Q99758 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.98■■□□□ 1.59
ABCA3Q99758 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.98■■□□□ 1.59
ABCA3Q99758 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCA3Q99758 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.98■■□□□ 1.59
ABCA3Q99758 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.98■■□□□ 1.59
ABCA3Q99758 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 AL355877.3-201ENST00000622820 899 ntBASIC24.98■■□□□ 1.59
ABCA3Q99758 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 LINC00565-201ENST00000562710 2331 ntBASIC24.98■■□□□ 1.59
ABCA3Q99758 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC24.98■■□□□ 1.59
ABCA3Q99758 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.98■■□□□ 1.59
ABCA3Q99758 AC034105.1-201ENST00000563488 319 ntBASIC24.98■■□□□ 1.59
ABCA3Q99758 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC24.98■■□□□ 1.59
ABCA3Q99758 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
ABCA3Q99758 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ABCA3Q99758 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.97■■□□□ 1.59
ABCA3Q99758 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
ABCA3Q99758 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC24.97■■□□□ 1.59
ABCA3Q99758 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCA3Q99758 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.97■■□□□ 1.59
ABCA3Q99758 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC24.97■■□□□ 1.59
ABCA3Q99758 AP001269.4-201ENST00000609611 512 ntBASIC24.97■■□□□ 1.59
ABCA3Q99758 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.97■■□□□ 1.59
ABCA3Q99758 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ABCA3Q99758 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC24.96■■□□□ 1.59
ABCA3Q99758 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.96■■□□□ 1.59
ABCA3Q99758 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
ABCA3Q99758 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.96■■□□□ 1.59
ABCA3Q99758 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ABCA3Q99758 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.96■■□□□ 1.59
ABCA3Q99758 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.96■■□□□ 1.59
ABCA3Q99758 AC005104.2-201ENST00000427818 678 ntBASIC24.96■■□□□ 1.59
ABCA3Q99758 AC098831.1-202ENST00000438821 336 ntBASIC24.96■■□□□ 1.59
ABCA3Q99758 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.96■■□□□ 1.59
ABCA3Q99758 Z82202.1-201ENST00000623446 1880 ntBASIC24.96■■□□□ 1.59
ABCA3Q99758 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ABCA3Q99758 TREX1-205ENST00000625293 1783 ntBASIC24.95■■□□□ 1.59
ABCA3Q99758 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ABCA3Q99758 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
ABCA3Q99758 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC24.95■■□□□ 1.59
ABCA3Q99758 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ABCA3Q99758 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms