Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 AC083880.1-201ENST00000608266 535 ntBASIC15.8■□□□□ 0.12
CLCC1Q96S66 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 MYC-209ENST00000641252 345 ntBASIC15.8■□□□□ 0.12
CLCC1Q96S66 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 AC068880.1-201ENST00000507289 2297 ntBASIC15.8■□□□□ 0.12
CLCC1Q96S66 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLCC1Q96S66 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLCC1Q96S66 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 AC124283.5-201ENST00000624661 1809 ntBASIC15.79■□□□□ 0.12
CLCC1Q96S66 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCC1Q96S66 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCC1Q96S66 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 PNMA6B-201ENST00000538162 1200 ntBASIC15.78■□□□□ 0.12
CLCC1Q96S66 AC142086.2-201ENST00000569753 217 ntBASIC15.78■□□□□ 0.12
CLCC1Q96S66 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 TNRC18P3-201ENST00000441896 2691 ntBASIC15.78■□□□□ 0.12
CLCC1Q96S66 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCC1Q96S66 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCC1Q96S66 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCC1Q96S66 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCC1Q96S66 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms