Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC138649.4-201ENST00000612222 287 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC005593.1-201ENST00000624894 515 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC107918.4-202ENST00000641623 219 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 H19-201ENST00000411754 1788 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 MIR943-201ENST00000401286 94 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 KRT18P2-201ENST00000447938 1258 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC023141.5-201ENST00000458585 616 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 RN7SL692P-201ENST00000464677 288 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 RN7SL190P-201ENST00000582519 257 ntBASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC5.72□□□□□ -1.49
HMCN1Q96RW7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 IGHGP-201ENST00000390555 1178 ntBASIC5.71□□□□□ -1.49
HMCN1Q96RW7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 AL589182.2-201ENST00000619332 1049 ntBASIC5.71□□□□□ -1.49
HMCN1Q96RW7 FAM99A-202ENST00000538190 1989 ntBASIC5.71□□□□□ -1.49
HMCN1Q96RW7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 CU639417.3-201ENST00000624240 1404 ntBASIC5.71□□□□□ -1.49
HMCN1Q96RW7 PAN3-AS1-201ENST00000563843 1351 ntBASIC5.71□□□□□ -1.49
HMCN1Q96RW7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HMCN1Q96RW7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 U91328.1-201ENST00000437528 223 ntBASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 LINC01126-201ENST00000623515 1646 ntBASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 FAM207CP-201ENST00000443486 507 ntBASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 SERBP1P5-201ENST00000510079 1181 ntBASIC5.71□□□□□ -1.5
HMCN1Q96RW7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HMCN1Q96RW7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms