Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS50Q96JG6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
VPS50Q96JG6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS50Q96JG6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
VPS50Q96JG6 AC018553.1-201ENST00000616682 1458 ntBASIC18.38■□□□□ 0.53
VPS50Q96JG6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS50Q96JG6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS50Q96JG6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS50Q96JG6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 AP000997.3-201ENST00000623333 2250 ntBASIC18.37■□□□□ 0.53
VPS50Q96JG6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 AL355075.4-201ENST00000554988 638 ntBASIC18.37■□□□□ 0.53
VPS50Q96JG6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 CR392000.1-201ENST00000624770 1228 ntBASIC18.37■□□□□ 0.53
VPS50Q96JG6 AL031985.4-201ENST00000642138 673 ntBASIC18.37■□□□□ 0.53
VPS50Q96JG6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS50Q96JG6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS50Q96JG6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 AC018470.1-201ENST00000624790 3129 ntBASIC18.36■□□□□ 0.53
VPS50Q96JG6 MMP23A-201ENST00000234610 1017 ntBASIC18.36■□□□□ 0.53
VPS50Q96JG6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 C1QL1P1-201ENST00000568105 661 ntBASIC18.36■□□□□ 0.53
VPS50Q96JG6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS50Q96JG6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS50Q96JG6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AP001271.2-201ENST00000624018 1556 ntBASIC18.35■□□□□ 0.53
VPS50Q96JG6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 ECEL1P3-201ENST00000427961 737 ntBASIC18.35■□□□□ 0.53
VPS50Q96JG6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 AC026271.3-201ENST00000571884 352 ntBASIC18.35■□□□□ 0.53
VPS50Q96JG6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS50Q96JG6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.35■□□□□ 0.53
VPS50Q96JG6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms