Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 AC008608.2-201ENST00000606089 416 ntBASIC20.3■□□□□ 0.84
LRCH3Q96II8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRCH3Q96II8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.3■□□□□ 0.84
LRCH3Q96II8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 MIR3917-201ENST00000580971 93 ntBASIC20.29■□□□□ 0.84
LRCH3Q96II8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
LRCH3Q96II8 GPAT2P1-201ENST00000444924 1672 ntBASIC20.29■□□□□ 0.84
LRCH3Q96II8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRCH3Q96II8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH3Q96II8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH3Q96II8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH3Q96II8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.28■□□□□ 0.84
LRCH3Q96II8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 AL592071.1-201ENST00000611956 408 ntBASIC20.28■□□□□ 0.84
LRCH3Q96II8 AC124864.1-201ENST00000623408 392 ntBASIC20.28■□□□□ 0.84
LRCH3Q96II8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRCH3Q96II8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.28■□□□□ 0.84
LRCH3Q96II8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 KRT18P3-201ENST00000451602 1288 ntBASIC20.27■□□□□ 0.84
LRCH3Q96II8 AP003733.1-201ENST00000491725 852 ntBASIC20.27■□□□□ 0.84
LRCH3Q96II8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.27■□□□□ 0.84
LRCH3Q96II8 AL596442.2-201ENST00000610240 980 ntBASIC20.27■□□□□ 0.84
LRCH3Q96II8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRCH3Q96II8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH3Q96II8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRCH3Q96II8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms