Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.83■□□□□ 0.6
SIPA1Q96FS4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 AC079602.3-201ENST00000623931 403 ntBASIC18.82■□□□□ 0.6
SIPA1Q96FS4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 AC008556.1-201ENST00000610908 2040 ntBASIC18.82■□□□□ 0.6
SIPA1Q96FS4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 AC125437.2-201ENST00000625180 2167 ntBASIC18.82■□□□□ 0.6
SIPA1Q96FS4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.82■□□□□ 0.6
SIPA1Q96FS4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 KRT18P23-201ENST00000435622 1283 ntBASIC18.81■□□□□ 0.6
SIPA1Q96FS4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 TSSC2-201ENST00000450217 709 ntBASIC18.81■□□□□ 0.6
SIPA1Q96FS4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 AC092329.2-201ENST00000598402 547 ntBASIC18.81■□□□□ 0.6
SIPA1Q96FS4 AL136038.4-201ENST00000603606 1261 ntBASIC18.81■□□□□ 0.6
SIPA1Q96FS4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 KRT8P7-201ENST00000533003 1432 ntBASIC18.81■□□□□ 0.6
SIPA1Q96FS4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIPA1Q96FS4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.8■□□□□ 0.6
SIPA1Q96FS4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 HLA-F-220ENST00000434407 884 ntBASIC18.8■□□□□ 0.6
SIPA1Q96FS4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 AC012313.10-201ENST00000623509 926 ntBASIC18.8■□□□□ 0.6
SIPA1Q96FS4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 AL162741.1-201ENST00000565563 1558 ntBASIC18.8■□□□□ 0.6
SIPA1Q96FS4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 AC016734.2-201ENST00000624325 1377 ntBASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.8■□□□□ 0.6
SIPA1Q96FS4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.79■□□□□ 0.6
SIPA1Q96FS4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms