Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AL512353.2-201ENST00000448759 1962 ntBASIC16.33■□□□□ 0.2
CPNE2Q96FN4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CPNE2Q96FN4 AC090164.3-201ENST00000610780 2143 ntBASIC16.33■□□□□ 0.2
CPNE2Q96FN4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CPNE2Q96FN4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CPNE2Q96FN4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.32■□□□□ 0.2
CPNE2Q96FN4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CPNE2Q96FN4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.31■□□□□ 0.2
CPNE2Q96FN4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 PCDHB18P-201ENST00000524813 2368 ntBASIC16.3■□□□□ 0.2
CPNE2Q96FN4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 KRT17P3-201ENST00000420566 1262 ntBASIC16.3■□□□□ 0.2
CPNE2Q96FN4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 AC142086.2-201ENST00000569753 217 ntBASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 WIZP1-201ENST00000531444 2299 ntBASIC16.3■□□□□ 0.2
CPNE2Q96FN4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CPNE2Q96FN4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms