Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC055717.3-201ENST00000622967 595 ntBASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM43Q96BQ3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 AC008608.2-201ENST00000606089 416 ntBASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 AL691403.2-201ENST00000618460 490 ntBASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.37■□□□□ 0.85
TRIM43Q96BQ3 TREX1-205ENST00000625293 1783 ntBASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AC132008.2-207ENST00000454517 770 ntBASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 FAM215A-202ENST00000632077 792 ntBASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRIM43Q96BQ3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 ZNF259P1-201ENST00000407656 1365 ntBASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 HNRNPDP1-201ENST00000439535 754 ntBASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 LINC00565-201ENST00000562710 2331 ntBASIC20.35■□□□□ 0.85
TRIM43Q96BQ3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 PGAM5P1-201ENST00000518923 814 ntBASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 MIR3180-4-201ENST00000582223 153 ntBASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.34■□□□□ 0.85
TRIM43Q96BQ3 LINC02084-201ENST00000606069 1096 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms