Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLNQ969V3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCLNQ969V3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCLNQ969V3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLNQ969V3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NCLNQ969V3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.23■□□□□ 0.51
NCLNQ969V3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
NCLNQ969V3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.23■□□□□ 0.51
NCLNQ969V3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCLNQ969V3 AC026471.1-201ENST00000564629 3026 ntBASIC18.23■□□□□ 0.51
NCLNQ969V3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
NCLNQ969V3 AL353807.1-201ENST00000427475 662 ntBASIC18.22■□□□□ 0.51
NCLNQ969V3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.22■□□□□ 0.51
NCLNQ969V3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.22■□□□□ 0.51
NCLNQ969V3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
NCLNQ969V3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCLNQ969V3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NCLNQ969V3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.22■□□□□ 0.51
NCLNQ969V3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLNQ969V3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 ZNF815P-204ENST00000434898 1737 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLNQ969V3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCLNQ969V3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NCLNQ969V3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NCLNQ969V3 AL596275.1-201ENST00000423464 877 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.21■□□□□ 0.51
NCLNQ969V3 C1QL1P1-201ENST00000568105 661 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 AF186192.3-201ENST00000583427 947 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.21■□□□□ 0.51
NCLNQ969V3 AP001412.1-201ENST00000608405 714 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 AL049637.2-201ENST00000641778 930 ntBASIC18.21■□□□□ 0.51
NCLNQ969V3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms