Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.12■■□□□ 1.29
RPGRQ92834 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.12■■□□□ 1.29
RPGRQ92834 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.12■■□□□ 1.29
RPGRQ92834 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.12■■□□□ 1.29
RPGRQ92834 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.12■■□□□ 1.29
RPGRQ92834 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 AC233702.3-201ENST00000578656 1387 ntBASIC23.12■■□□□ 1.29
RPGRQ92834 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RPGRQ92834 AL157384.1-201ENST00000445995 2473 ntBASIC23.11■■□□□ 1.29
RPGRQ92834 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.11■■□□□ 1.29
RPGRQ92834 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 AL022342.1-201ENST00000400363 863 ntBASIC23.11■■□□□ 1.29
RPGRQ92834 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.11■■□□□ 1.29
RPGRQ92834 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
RPGRQ92834 GPR32P1-201ENST00000601788 811 ntBASIC23.11■■□□□ 1.29
RPGRQ92834 AC099336.1-202ENST00000602961 463 ntBASIC23.11■■□□□ 1.29
RPGRQ92834 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
RPGRQ92834 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC23.11■■□□□ 1.29
RPGRQ92834 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 AC034236.2-201ENST00000606662 1610 ntBASIC23.11■■□□□ 1.29
RPGRQ92834 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.11■■□□□ 1.29
RPGRQ92834 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RPGRQ92834 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
RPGRQ92834 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RPGRQ92834 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.1■■□□□ 1.29
RPGRQ92834 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RPGRQ92834 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.1■■□□□ 1.29
RPGRQ92834 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
RPGRQ92834 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.1■■□□□ 1.29
RPGRQ92834 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RPGRQ92834 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.1■■□□□ 1.29
RPGRQ92834 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.1■■□□□ 1.29
RPGRQ92834 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.1■■□□□ 1.29
RPGRQ92834 Z69720.1-201ENST00000601483 472 ntBASIC23.1■■□□□ 1.29
RPGRQ92834 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 KRT8P32-201ENST00000512863 1461 ntBASIC23.1■■□□□ 1.29
RPGRQ92834 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RPGRQ92834 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.1■■□□□ 1.29
RPGRQ92834 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RPGRQ92834 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.09■■□□□ 1.29
RPGRQ92834 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RPGRQ92834 AC006333.2-201ENST00000607957 2099 ntBASIC23.09■■□□□ 1.29
RPGRQ92834 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
RPGRQ92834 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPGRQ92834 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RPGRQ92834 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.09■■□□□ 1.29
RPGRQ92834 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.09■■□□□ 1.29
RPGRQ92834 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.09■■□□□ 1.29
RPGRQ92834 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC23.09■■□□□ 1.29
RPGRQ92834 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms