Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
TOPBP1Q92547 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
TOPBP1Q92547 AL391422.3-201ENST00000603791 2761 ntBASIC31.47■■■□□ 2.63
TOPBP1Q92547 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOPBP1Q92547 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
TOPBP1Q92547 AC006333.2-201ENST00000607957 2099 ntBASIC31.47■■■□□ 2.63
TOPBP1Q92547 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC31.46■■■□□ 2.63
TOPBP1Q92547 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
TOPBP1Q92547 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC31.46■■■□□ 2.63
TOPBP1Q92547 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC31.46■■■□□ 2.63
TOPBP1Q92547 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC31.46■■■□□ 2.63
TOPBP1Q92547 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOPBP1Q92547 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC31.45■■■□□ 2.63
TOPBP1Q92547 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TOPBP1Q92547 CSF3-203ENST00000394148 622 ntTSL 3 BASIC31.45■■■□□ 2.63
TOPBP1Q92547 AC011840.4-201ENST00000578471 627 ntBASIC31.45■■■□□ 2.63
TOPBP1Q92547 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC31.45■■■□□ 2.63
TOPBP1Q92547 AC022898.2-201ENST00000616822 1312 ntBASIC31.45■■■□□ 2.62
TOPBP1Q92547 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
TOPBP1Q92547 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TOPBP1Q92547 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TOPBP1Q92547 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 AC140113.2-201ENST00000604370 208 ntBASIC31.44■■■□□ 2.62
TOPBP1Q92547 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 CYP51A1P1-201ENST00000492267 1507 ntBASIC31.44■■■□□ 2.62
TOPBP1Q92547 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 ZNF259P1-201ENST00000407656 1365 ntBASIC31.44■■■□□ 2.62
TOPBP1Q92547 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 REEP1-209ENST00000541910 969 ntTSL 2 BASIC31.44■■■□□ 2.62
TOPBP1Q92547 AC010327.4-202ENST00000591484 748 ntBASIC31.44■■■□□ 2.62
TOPBP1Q92547 AC116407.3-201ENST00000623905 1129 ntBASIC31.44■■■□□ 2.62
TOPBP1Q92547 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOPBP1Q92547 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOPBP1Q92547 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TOPBP1Q92547 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TOPBP1Q92547 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC31.43■■■□□ 2.62
TOPBP1Q92547 KRT8P32-201ENST00000512863 1461 ntBASIC31.42■■■□□ 2.62
TOPBP1Q92547 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TOPBP1Q92547 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOPBP1Q92547 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOPBP1Q92547 HES2-202ENST00000377836 507 ntTSL 2 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 MIR940-201ENST00000401276 94 ntBASIC31.42■■■□□ 2.62
TOPBP1Q92547 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 AP001269.4-201ENST00000609611 512 ntBASIC31.42■■■□□ 2.62
TOPBP1Q92547 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC31.42■■■□□ 2.62
TOPBP1Q92547 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOPBP1Q92547 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 HIST2H3DP1-201ENST00000401004 416 ntBASIC31.41■■■□□ 2.62
TOPBP1Q92547 RBM17P3-201ENST00000417687 1192 ntBASIC31.41■■■□□ 2.62
TOPBP1Q92547 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 AC098831.1-202ENST00000438821 336 ntBASIC31.41■■■□□ 2.62
TOPBP1Q92547 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 CD63-204ENST00000546939 779 ntTSL 3 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 AC034105.1-201ENST00000563488 319 ntBASIC31.41■■■□□ 2.62
TOPBP1Q92547 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 AL139424.1-201ENST00000607572 797 ntBASIC31.41■■■□□ 2.62
TOPBP1Q92547 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOPBP1Q92547 TP73-202ENST00000354437 2140 ntTSL 5 BASIC31.41■■■□□ 2.62
TOPBP1Q92547 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOPBP1Q92547 TCF3P1-201ENST00000423021 1937 ntBASIC31.4■■■□□ 2.62
TOPBP1Q92547 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOPBP1Q92547 UPF3AP3-201ENST00000420996 769 ntBASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms