Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRIPQ8WXE1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 IRX1P1-201ENST00000438849 1838 ntBASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 HCG11-201ENST00000411553 5696 ntBASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRIPQ8WXE1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 LTB4R2-202ENST00000528054 3092 ntBASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 AC120498.8-201ENST00000614275 531 ntBASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 AC068880.1-201ENST00000507289 2297 ntBASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRIPQ8WXE1 FZD10-202ENST00000539839 3282 ntBASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 NOC2LP1-202ENST00000452600 2235 ntBASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 Z98044.1-201ENST00000632503 1764 ntBASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.65■□□□□ 0.9
ATRIPQ8WXE1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms