Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 HLA-F-220ENST00000434407 884 ntBASIC18.98■□□□□ 0.63
CHD5Q8TDI0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHD5Q8TDI0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 KRT18P23-201ENST00000435622 1283 ntBASIC18.97■□□□□ 0.63
CHD5Q8TDI0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHD5Q8TDI0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD5Q8TDI0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 KRT18P38-201ENST00000449496 1282 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 GCSHP2-201ENST00000560971 527 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 NTF6B-201ENST00000591913 560 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 MIR564-202ENST00000385049 94 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 AC139887.4-201ENST00000607877 719 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 HYMAI.1-201ENST00000620949 238 ntBASIC18.95■□□□□ 0.62
CHD5Q8TDI0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHD5Q8TDI0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 RNF152P1-201ENST00000397754 604 ntBASIC18.94■□□□□ 0.62
CHD5Q8TDI0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHD5Q8TDI0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms