Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BEST2Q8NFU1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST2Q8NFU1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BEST2Q8NFU1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.2■□□□□ 0.82
BEST2Q8NFU1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 AL049812.1-201ENST00000432563 2267 ntBASIC20.19■□□□□ 0.82
BEST2Q8NFU1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.19■□□□□ 0.82
BEST2Q8NFU1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 MIR564-202ENST00000385049 94 ntBASIC20.18■□□□□ 0.82
BEST2Q8NFU1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.18■□□□□ 0.82
BEST2Q8NFU1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 GCSHP2-201ENST00000560971 527 ntBASIC20.18■□□□□ 0.82
BEST2Q8NFU1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BEST2Q8NFU1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 AC087388.1-201ENST00000571370 1112 ntBASIC20.17■□□□□ 0.82
BEST2Q8NFU1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
BEST2Q8NFU1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.16■□□□□ 0.82
BEST2Q8NFU1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.16■□□□□ 0.82
BEST2Q8NFU1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms