Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AC092597.1-201ENST00000487352 616 ntBASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 LINC01711-201ENST00000598340 967 ntBASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AC004263.2-201ENST00000617183 678 ntBASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF248Q8NDW4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 AP002414.4-201ENST00000589764 1148 ntBASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF248Q8NDW4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 AP000593.1-201ENST00000393668 712 ntBASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.93■□□□□ 0.46
ZNF248Q8NDW4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 AP002383.4-201ENST00000442518 975 ntBASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.92■□□□□ 0.46
ZNF248Q8NDW4 AC009078.2-202ENST00000463353 338 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms