Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 TSEN15P1-201ENST00000423257 515 ntBASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 KRT18P2-201ENST00000447938 1258 ntBASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LTBP4Q8N2S1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 MIR3180-4-201ENST00000582223 153 ntBASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 AC005498.2-205ENST00000593218 784 ntBASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 AC093512.1-201ENST00000617969 520 ntBASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 AL139288.1-201ENST00000623748 933 ntBASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
LTBP4Q8N2S1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
LTBP4Q8N2S1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 AC112777.1-201ENST00000540175 1423 ntBASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 AL139400.1-201ENST00000366220 510 ntBASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 AC015922.1-201ENST00000421102 1152 ntBASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 GSAP-205ENST00000430584 600 ntTSL 5 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 Z92544.3-201ENST00000624747 417 ntBASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 AC063926.2-201ENST00000623766 1308 ntBASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LTBP4Q8N2S1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 MEIS3P1-201ENST00000495167 958 ntBASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 AC079834.2-201ENST00000609776 1949 ntBASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 DUX4L17-201ENST00000557360 1267 ntBASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 C20orf181-201ENST00000623918 480 ntBASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LTBP4Q8N2S1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 AL356309.3-201ENST00000624132 1934 ntBASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 MIR4745-201ENST00000577608 62 ntBASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 SMG8-203ENST00000578922 2178 ntBASIC26.05■■□□□ 1.76
LTBP4Q8N2S1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC26.04■■□□□ 1.76
LTBP4Q8N2S1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTBP4Q8N2S1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LTBP4Q8N2S1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC26.04■■□□□ 1.76
LTBP4Q8N2S1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms