Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC090164.3-201ENST00000610780 2143 ntBASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 AF186192.3-201ENST00000583427 947 ntBASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00346Q8IVM7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AC004951.3-201ENST00000418645 1148 ntBASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AC011298.2-201ENST00000617989 482 ntBASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ITM2C-210ENST00000620962 501 ntBASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00346Q8IVM7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 RARRES2P10-201ENST00000564312 460 ntBASIC16.62■□□□□ 0.25
LINC00346Q8IVM7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms