Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MIR4674-201ENST00000582457 87 ntBASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 AC073592.3-201ENST00000625118 1834 ntBASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COLCA1Q6ZS62 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CCR12P-201ENST00000446203 998 ntBASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 C2orf69P3-201ENST00000565542 1120 ntBASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 MYC-208ENST00000641036 567 ntBASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 AC112777.1-201ENST00000540175 1423 ntBASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COLCA1Q6ZS62 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AP003041.3-201ENST00000527151 707 ntBASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 EGLN1P1-201ENST00000531623 762 ntBASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC116562.4-202ENST00000641738 218 ntBASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC120498.9-201ENST00000339021 3867 ntBASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COLCA1Q6ZS62 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
COLCA1Q6ZS62 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
COLCA1Q6ZS62 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
COLCA1Q6ZS62 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.14■□□□□ 0.18
COLCA1Q6ZS62 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 MMP23A-201ENST00000234610 1017 ntBASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.14■□□□□ 0.17
COLCA1Q6ZS62 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms