Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL4Q6ZR62 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 AC005363.2-201ENST00000618631 242 ntBASIC17.61■□□□□ 0.41
RTL4Q6ZR62 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL4Q6ZR62 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 TSPY14P-201ENST00000303979 915 ntBASIC17.6■□□□□ 0.41
RTL4Q6ZR62 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 AC128688.1-201ENST00000487626 519 ntBASIC17.6■□□□□ 0.41
RTL4Q6ZR62 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PRSS44-201ENST00000515154 1146 ntBASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL4Q6ZR62 HTR7P1-202ENST00000624664 4411 ntBASIC17.59■□□□□ 0.41
RTL4Q6ZR62 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 FAM210CP-201ENST00000445714 574 ntBASIC17.59■□□□□ 0.41
RTL4Q6ZR62 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 CKBP1-201ENST00000565489 1086 ntBASIC17.59■□□□□ 0.41
RTL4Q6ZR62 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL4Q6ZR62 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL4Q6ZR62 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms