Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.18■□□□□ 0.66
CASC4Q6P4E1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 AC110285.5-201ENST00000611501 352 ntBASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CASC4Q6P4E1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 RN7SL471P-201ENST00000580476 299 ntBASIC19.16■□□□□ 0.66
CASC4Q6P4E1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 AC073648.6-201ENST00000641589 218 ntBASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CASC4Q6P4E1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 Z85996.1-201ENST00000494644 937 ntBASIC19.15■□□□□ 0.66
CASC4Q6P4E1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.15■□□□□ 0.66
CASC4Q6P4E1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CASC4Q6P4E1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CASC4Q6P4E1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms