Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
H3F3CQ6NXT2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 AC141586.3-201ENST00000562166 1838 ntBASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 AL109659.2-201ENST00000606809 1674 ntBASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 AL158211.5-201ENST00000623583 2518 ntBASIC17.36■□□□□ 0.37
H3F3CQ6NXT2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AL512353.2-201ENST00000448759 1962 ntBASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 HYMAI.1-201ENST00000620949 238 ntBASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AP000550.4-202ENST00000639755 178 ntBASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AC036111.1-201ENST00000533973 1582 ntBASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 FP475955.4-201ENST00000623131 1990 ntBASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.35■□□□□ 0.37
H3F3CQ6NXT2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 PCDHAC2-203ENST00000615316 3011 ntBASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 IRX1P1-201ENST00000438849 1838 ntBASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H3F3CQ6NXT2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms