Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL13A1Q5TAT6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 MTDHP4-201ENST00000600287 670 ntBASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL13A1Q5TAT6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
COL13A1Q5TAT6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL13A1Q5TAT6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.08■□□□□ 0.96
COL13A1Q5TAT6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.08■□□□□ 0.96
COL13A1Q5TAT6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL13A1Q5TAT6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 NME2P1-201ENST00000426182 414 ntBASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 AC108751.1-201ENST00000490852 363 ntBASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 GPR89P-201ENST00000407924 1495 ntBASIC21.07■□□□□ 0.96
COL13A1Q5TAT6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 AC005229.4-201ENST00000610085 2198 ntBASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 UGT1A2P-201ENST00000454886 866 ntBASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 AC024563.2-201ENST00000603282 481 ntBASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 AP000867.4-201ENST00000641616 219 ntBASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL13A1Q5TAT6 DPP3P2-201ENST00000416030 1696 ntBASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 AL121603.2-201ENST00000557373 2117 ntBASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
COL13A1Q5TAT6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 AC018845.2-201ENST00000568326 409 ntBASIC21.04■□□□□ 0.96
COL13A1Q5TAT6 LINC02560-201ENST00000596379 459 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms