Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 TREX1-205ENST00000625293 1783 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 AC104109.2-201ENST00000602919 1418 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 AC034105.1-201ENST00000563488 319 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 MIR3180-4-201ENST00000582223 153 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 AC073314.1-201ENST00000568729 2216 ntBASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNAPC4Q5SXM2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 FAM197Y3-203ENST00000618346 717 ntBASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SNAPC4Q5SXM2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 LBH-204ENST00000406087 559 ntTSL 4 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 CD63-204ENST00000546939 779 ntTSL 3 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC30.67■■■□□ 2.5
SNAPC4Q5SXM2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 YBX2P1-201ENST00000394192 760 ntBASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 AC011840.4-201ENST00000578471 627 ntBASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 AC005336.2-201ENST00000593183 939 ntBASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 AL512353.2-201ENST00000448759 1962 ntBASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC30.66■■■□□ 2.5
SNAPC4Q5SXM2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 AC027601.4-201ENST00000611259 610 ntBASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNAPC4Q5SXM2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 AC004967.1-201ENST00000453589 447 ntBASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 AP001269.4-201ENST00000609611 512 ntBASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 AL512408.1-201ENST00000569378 2000 ntBASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SNAPC4Q5SXM2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SNAPC4Q5SXM2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC30.64■■■□□ 2.49
SNAPC4Q5SXM2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SNAPC4Q5SXM2 CCS-201ENST00000310190 942 ntTSL 5 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 HNRNPA1P28-201ENST00000424481 961 ntBASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 RBM17P3-201ENST00000417687 1192 ntBASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SNAPC4Q5SXM2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms